Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
STAG1Q8WVM7 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
STAG1Q8WVM7 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
STAG1Q8WVM7 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
STAG1Q8WVM7 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
STAG1Q8WVM7 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
STAG1Q8WVM7 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
STAG1Q8WVM7 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
STAG1Q8WVM7 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
STAG1Q8WVM7 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
STAG1Q8WVM7 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.85■□□□□ 0.77
STAG1Q8WVM7 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
STAG1Q8WVM7 RNU1-129P-201ENST00000384064 167 ntBASIC19.85■□□□□ 0.77
STAG1Q8WVM7 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.85■□□□□ 0.77
STAG1Q8WVM7 RPS8P6-201ENST00000426177 609 ntBASIC19.85■□□□□ 0.77
STAG1Q8WVM7 ALG1L5P-201ENST00000482043 771 ntBASIC19.85■□□□□ 0.77
STAG1Q8WVM7 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.85■□□□□ 0.77
STAG1Q8WVM7 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.85■□□□□ 0.77
STAG1Q8WVM7 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.85■□□□□ 0.77
STAG1Q8WVM7 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.85■□□□□ 0.77
STAG1Q8WVM7 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.85■□□□□ 0.77
STAG1Q8WVM7 U1.21-201ENST00000580816 167 ntBASIC19.85■□□□□ 0.77
STAG1Q8WVM7 AP001160.2-201ENST00000596071 487 ntBASIC19.85■□□□□ 0.77
STAG1Q8WVM7 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
STAG1Q8WVM7 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
STAG1Q8WVM7 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
STAG1Q8WVM7 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
STAG1Q8WVM7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
STAG1Q8WVM7 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.85■□□□□ 0.77
STAG1Q8WVM7 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
STAG1Q8WVM7 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
STAG1Q8WVM7 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
STAG1Q8WVM7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
STAG1Q8WVM7 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
STAG1Q8WVM7 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
STAG1Q8WVM7 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
STAG1Q8WVM7 HTR7P1-202ENST00000624664 4411 ntBASIC19.85■□□□□ 0.77
STAG1Q8WVM7 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
STAG1Q8WVM7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
STAG1Q8WVM7 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
STAG1Q8WVM7 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
STAG1Q8WVM7 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
STAG1Q8WVM7 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
STAG1Q8WVM7 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.84■□□□□ 0.77
STAG1Q8WVM7 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
STAG1Q8WVM7 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.84■□□□□ 0.77
STAG1Q8WVM7 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
STAG1Q8WVM7 AL671710.1-201ENST00000610245 2349 ntBASIC19.84■□□□□ 0.77
STAG1Q8WVM7 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
STAG1Q8WVM7 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
STAG1Q8WVM7 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
STAG1Q8WVM7 AC211486.1-202ENST00000416371 468 ntBASIC19.84■□□□□ 0.77
STAG1Q8WVM7 HTR5BP-201ENST00000430851 1154 ntBASIC19.84■□□□□ 0.77
STAG1Q8WVM7 MKNK2P1-201ENST00000437526 628 ntBASIC19.84■□□□□ 0.77
STAG1Q8WVM7 AC211476.1-201ENST00000503899 468 ntBASIC19.84■□□□□ 0.77
STAG1Q8WVM7 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.84■□□□□ 0.77
STAG1Q8WVM7 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.84■□□□□ 0.77
STAG1Q8WVM7 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.84■□□□□ 0.77
STAG1Q8WVM7 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
STAG1Q8WVM7 MIR3909-201ENST00000579518 119 ntBASIC19.84■□□□□ 0.77
STAG1Q8WVM7 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
STAG1Q8WVM7 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
STAG1Q8WVM7 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
STAG1Q8WVM7 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
STAG1Q8WVM7 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
STAG1Q8WVM7 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.84■□□□□ 0.77
STAG1Q8WVM7 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
STAG1Q8WVM7 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.84■□□□□ 0.77
STAG1Q8WVM7 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
STAG1Q8WVM7 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
STAG1Q8WVM7 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
STAG1Q8WVM7 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
STAG1Q8WVM7 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.83■□□□□ 0.77
STAG1Q8WVM7 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.83■□□□□ 0.77
STAG1Q8WVM7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.83■□□□□ 0.77
STAG1Q8WVM7 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
STAG1Q8WVM7 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.83■□□□□ 0.77
STAG1Q8WVM7 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
STAG1Q8WVM7 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
STAG1Q8WVM7 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
STAG1Q8WVM7 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
STAG1Q8WVM7 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
STAG1Q8WVM7 AL603756.1-201ENST00000606511 2163 ntBASIC19.83■□□□□ 0.77
STAG1Q8WVM7 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.83■□□□□ 0.77
STAG1Q8WVM7 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
STAG1Q8WVM7 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC19.83■□□□□ 0.77
STAG1Q8WVM7 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.83■□□□□ 0.77
STAG1Q8WVM7 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
STAG1Q8WVM7 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.83■□□□□ 0.77
STAG1Q8WVM7 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
STAG1Q8WVM7 AL031055.1-201ENST00000606362 631 ntBASIC19.83■□□□□ 0.77
STAG1Q8WVM7 AC079781.4-201ENST00000641908 219 ntBASIC19.83■□□□□ 0.77
STAG1Q8WVM7 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
STAG1Q8WVM7 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
STAG1Q8WVM7 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19.83■□□□□ 0.76
STAG1Q8WVM7 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.83■□□□□ 0.76
STAG1Q8WVM7 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
STAG1Q8WVM7 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
STAG1Q8WVM7 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
STAG1Q8WVM7 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms