Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 ZZEF1-201ENST00000381638 11456 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 CICP8-201ENST00000455800 2813 ntBASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 GMFB-201ENST00000358056 4301 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 ZFC3H1-201ENST00000378743 7285 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 ESPL1-201ENST00000257934 6623 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 AP002008.2-201ENST00000635926 4870 ntBASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 PDE7B-201ENST00000308191 5390 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 DNM3-208ENST00000627582 7625 ntAPPRIS ALT1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 TFP1-202ENST00000475455 1573 ntBASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
SPTSSBQ8NFR3 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 ZCCHC9-201ENST00000254037 4606 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 AC006449.5-201ENST00000610658 2098 ntBASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 NME9-203ENST00000383180 2133 ntTSL 2 BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 NRXN1-233ENST00000630543 4500 ntTSL 5 BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 AC012414.1-201ENST00000556676 535 ntBASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 MIR4767-201ENST00000582827 78 ntBASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 AC105020.6-201ENST00000621523 1217 ntBASIC9.28□□□□□ -0.92
SPTSSBQ8NFR3 HLA-DQB1-201ENST00000374943 1656 ntBASIC9.28□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms