Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 TSPY19P-201ENST00000418461 509 ntBASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 LINC00982-205ENST00000420957 435 ntBASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 TSPY18P-201ENST00000441642 509 ntBASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 PRYP5-201ENST00000451909 266 ntBASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 KRT18P31-201ENST00000506277 1292 ntBASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 AL121772.3-201ENST00000610840 674 ntBASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 AC106886.4-201ENST00000623557 2502 ntBASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 AC092068.3-201ENST00000587894 2016 ntBASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF439Q8NDP4 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF439Q8NDP4 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
ZNF439Q8NDP4 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.06□□□□□ -0.16
ZNF439Q8NDP4 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF439Q8NDP4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.06□□□□□ -0.16
ZNF439Q8NDP4 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.06□□□□□ -0.16
ZNF439Q8NDP4 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF439Q8NDP4 AC011676.5-201ENST00000624864 2660 ntBASIC14.06□□□□□ -0.16
ZNF439Q8NDP4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF439Q8NDP4 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF439Q8NDP4 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF439Q8NDP4 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
ZNF439Q8NDP4 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF439Q8NDP4 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF439Q8NDP4 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.06□□□□□ -0.16
ZNF439Q8NDP4 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.06□□□□□ -0.16
ZNF439Q8NDP4 AL139288.1-201ENST00000623748 933 ntBASIC14.06□□□□□ -0.16
ZNF439Q8NDP4 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.06□□□□□ -0.16
ZNF439Q8NDP4 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF439Q8NDP4 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF439Q8NDP4 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.06□□□□□ -0.16
ZNF439Q8NDP4 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF439Q8NDP4 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF439Q8NDP4 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF439Q8NDP4 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
ZNF439Q8NDP4 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF439Q8NDP4 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF439Q8NDP4 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF439Q8NDP4 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF439Q8NDP4 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
ZNF439Q8NDP4 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF439Q8NDP4 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.06□□□□□ -0.16
ZNF439Q8NDP4 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF439Q8NDP4 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF439Q8NDP4 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF439Q8NDP4 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF439Q8NDP4 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
ZNF439Q8NDP4 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF439Q8NDP4 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
ZNF439Q8NDP4 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF439Q8NDP4 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF439Q8NDP4 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF439Q8NDP4 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF439Q8NDP4 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF439Q8NDP4 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF439Q8NDP4 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF439Q8NDP4 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
ZNF439Q8NDP4 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF439Q8NDP4 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF439Q8NDP4 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF439Q8NDP4 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF439Q8NDP4 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
ZNF439Q8NDP4 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
ZNF439Q8NDP4 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF439Q8NDP4 BX005266.1-201ENST00000473402 457 ntBASIC14.05□□□□□ -0.16
ZNF439Q8NDP4 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.05□□□□□ -0.16
ZNF439Q8NDP4 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.05□□□□□ -0.16
ZNF439Q8NDP4 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
ZNF439Q8NDP4 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.05□□□□□ -0.16
ZNF439Q8NDP4 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms