Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.68■□□□□ 0.26
TRAM1L1Q8N609 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.68■□□□□ 0.26
TRAM1L1Q8N609 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.68■□□□□ 0.26
TRAM1L1Q8N609 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.68■□□□□ 0.26
TRAM1L1Q8N609 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.68■□□□□ 0.26
TRAM1L1Q8N609 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAM1L1Q8N609 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
TRAM1L1Q8N609 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAM1L1Q8N609 MTDHP5-201ENST00000598980 586 ntBASIC16.68■□□□□ 0.26
TRAM1L1Q8N609 AC068137.2-201ENST00000605408 478 ntBASIC16.68■□□□□ 0.26
TRAM1L1Q8N609 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.68■□□□□ 0.26
TRAM1L1Q8N609 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAM1L1Q8N609 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
TRAM1L1Q8N609 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.68■□□□□ 0.26
TRAM1L1Q8N609 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAM1L1Q8N609 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAM1L1Q8N609 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TRAM1L1Q8N609 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.68■□□□□ 0.26
TRAM1L1Q8N609 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAM1L1Q8N609 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAM1L1Q8N609 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAM1L1Q8N609 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAM1L1Q8N609 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.67■□□□□ 0.26
TRAM1L1Q8N609 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAM1L1Q8N609 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAM1L1Q8N609 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAM1L1Q8N609 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAM1L1Q8N609 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAM1L1Q8N609 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAM1L1Q8N609 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
TRAM1L1Q8N609 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
TRAM1L1Q8N609 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAM1L1Q8N609 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAM1L1Q8N609 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAM1L1Q8N609 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAM1L1Q8N609 YBX2P1-201ENST00000394192 760 ntBASIC16.67■□□□□ 0.26
TRAM1L1Q8N609 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TRAM1L1Q8N609 BX842568.4-201ENST00000421222 227 ntBASIC16.67■□□□□ 0.26
TRAM1L1Q8N609 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.67■□□□□ 0.26
TRAM1L1Q8N609 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
TRAM1L1Q8N609 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.67■□□□□ 0.26
TRAM1L1Q8N609 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.67■□□□□ 0.26
TRAM1L1Q8N609 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.67■□□□□ 0.26
TRAM1L1Q8N609 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.67■□□□□ 0.26
TRAM1L1Q8N609 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.67■□□□□ 0.26
TRAM1L1Q8N609 AL139011.1-202ENST00000642063 584 ntBASIC16.67■□□□□ 0.26
TRAM1L1Q8N609 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAM1L1Q8N609 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAM1L1Q8N609 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAM1L1Q8N609 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TRAM1L1Q8N609 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.67■□□□□ 0.26
TRAM1L1Q8N609 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.67■□□□□ 0.26
TRAM1L1Q8N609 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TRAM1L1Q8N609 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.67■□□□□ 0.26
TRAM1L1Q8N609 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.67■□□□□ 0.26
TRAM1L1Q8N609 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
TRAM1L1Q8N609 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAM1L1Q8N609 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAM1L1Q8N609 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAM1L1Q8N609 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TRAM1L1Q8N609 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TRAM1L1Q8N609 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAM1L1Q8N609 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TRAM1L1Q8N609 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TRAM1L1Q8N609 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TRAM1L1Q8N609 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAM1L1Q8N609 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAM1L1Q8N609 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAM1L1Q8N609 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TRAM1L1Q8N609 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAM1L1Q8N609 AC140658.5-201ENST00000438532 169 ntBASIC16.66■□□□□ 0.26
TRAM1L1Q8N609 DNAJB3-201ENST00000446806 729 ntBASIC16.66■□□□□ 0.26
TRAM1L1Q8N609 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAM1L1Q8N609 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.66■□□□□ 0.26
TRAM1L1Q8N609 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAM1L1Q8N609 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAM1L1Q8N609 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAM1L1Q8N609 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAM1L1Q8N609 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAM1L1Q8N609 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAM1L1Q8N609 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.66■□□□□ 0.26
TRAM1L1Q8N609 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAM1L1Q8N609 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.66■□□□□ 0.26
TRAM1L1Q8N609 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAM1L1Q8N609 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAM1L1Q8N609 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAM1L1Q8N609 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAM1L1Q8N609 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TRAM1L1Q8N609 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAM1L1Q8N609 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAM1L1Q8N609 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAM1L1Q8N609 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TRAM1L1Q8N609 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAM1L1Q8N609 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TRAM1L1Q8N609 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAM1L1Q8N609 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TRAM1L1Q8N609 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.65■□□□□ 0.26
TRAM1L1Q8N609 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.65■□□□□ 0.26
TRAM1L1Q8N609 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
TRAM1L1Q8N609 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms