Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RAB43Q86YS6 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RAB43Q86YS6 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.22■□□□□ 0.19
RAB43Q86YS6 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RAB43Q86YS6 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.22■□□□□ 0.19
RAB43Q86YS6 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB43Q86YS6 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB43Q86YS6 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB43Q86YS6 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB43Q86YS6 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB43Q86YS6 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB43Q86YS6 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.22■□□□□ 0.19
RAB43Q86YS6 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RAB43Q86YS6 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB43Q86YS6 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB43Q86YS6 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.22■□□□□ 0.19
RAB43Q86YS6 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.22■□□□□ 0.19
RAB43Q86YS6 AC211486.1-202ENST00000416371 468 ntBASIC16.22■□□□□ 0.19
RAB43Q86YS6 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.22■□□□□ 0.19
RAB43Q86YS6 KRT18P2-201ENST00000447938 1258 ntBASIC16.22■□□□□ 0.19
RAB43Q86YS6 HCG4B-203ENST00000450128 991 ntBASIC16.22■□□□□ 0.19
RAB43Q86YS6 AC211476.1-201ENST00000503899 468 ntBASIC16.22■□□□□ 0.19
RAB43Q86YS6 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB43Q86YS6 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.22■□□□□ 0.19
RAB43Q86YS6 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
RAB43Q86YS6 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.22■□□□□ 0.19
RAB43Q86YS6 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.22■□□□□ 0.19
RAB43Q86YS6 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.22■□□□□ 0.19
RAB43Q86YS6 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.22■□□□□ 0.19
RAB43Q86YS6 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB43Q86YS6 AP001160.2-201ENST00000596071 487 ntBASIC16.22■□□□□ 0.19
RAB43Q86YS6 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.22■□□□□ 0.19
RAB43Q86YS6 AC134684.3-201ENST00000641758 218 ntBASIC16.22■□□□□ 0.19
RAB43Q86YS6 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.22■□□□□ 0.19
RAB43Q86YS6 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.22■□□□□ 0.19
RAB43Q86YS6 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
RAB43Q86YS6 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RAB43Q86YS6 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.22■□□□□ 0.19
RAB43Q86YS6 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB43Q86YS6 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB43Q86YS6 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
RAB43Q86YS6 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
RAB43Q86YS6 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.22■□□□□ 0.19
RAB43Q86YS6 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB43Q86YS6 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB43Q86YS6 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.22■□□□□ 0.19
RAB43Q86YS6 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
RAB43Q86YS6 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB43Q86YS6 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RAB43Q86YS6 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
RAB43Q86YS6 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB43Q86YS6 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB43Q86YS6 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
RAB43Q86YS6 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RAB43Q86YS6 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.21■□□□□ 0.19
RAB43Q86YS6 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
RAB43Q86YS6 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
RAB43Q86YS6 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
RAB43Q86YS6 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.21■□□□□ 0.19
RAB43Q86YS6 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.21■□□□□ 0.19
RAB43Q86YS6 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB43Q86YS6 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB43Q86YS6 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.21■□□□□ 0.19
RAB43Q86YS6 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
RAB43Q86YS6 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
RAB43Q86YS6 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
RAB43Q86YS6 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.21■□□□□ 0.19
RAB43Q86YS6 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RAB43Q86YS6 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.21■□□□□ 0.19
RAB43Q86YS6 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
RAB43Q86YS6 AC005829.1-201ENST00000570002 483 ntBASIC16.21■□□□□ 0.19
RAB43Q86YS6 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
RAB43Q86YS6 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB43Q86YS6 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB43Q86YS6 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB43Q86YS6 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.21■□□□□ 0.19
RAB43Q86YS6 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RAB43Q86YS6 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB43Q86YS6 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
RAB43Q86YS6 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
RAB43Q86YS6 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
RAB43Q86YS6 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.21■□□□□ 0.18
RAB43Q86YS6 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.21■□□□□ 0.18
RAB43Q86YS6 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RAB43Q86YS6 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB43Q86YS6 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
RAB43Q86YS6 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAB43Q86YS6 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB43Q86YS6 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB43Q86YS6 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAB43Q86YS6 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.2■□□□□ 0.18
RAB43Q86YS6 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB43Q86YS6 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAB43Q86YS6 AL121761.2-201ENST00000598007 1648 ntBASIC16.2■□□□□ 0.18
RAB43Q86YS6 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAB43Q86YS6 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
RAB43Q86YS6 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
RAB43Q86YS6 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB43Q86YS6 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
RAB43Q86YS6 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms