Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 MIR6869-201ENST00000619434 62 ntBASIC20.95■□□□□ 0.94
COL23A1Q86Y22 AC068587.10-201ENST00000641210 219 ntBASIC20.95■□□□□ 0.94
COL23A1Q86Y22 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL23A1Q86Y22 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL23A1Q86Y22 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.95■□□□□ 0.94
COL23A1Q86Y22 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL23A1Q86Y22 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COL23A1Q86Y22 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL23A1Q86Y22 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
COL23A1Q86Y22 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL23A1Q86Y22 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.94■□□□□ 0.94
COL23A1Q86Y22 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC20.94■□□□□ 0.94
COL23A1Q86Y22 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL23A1Q86Y22 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC20.94■□□□□ 0.94
COL23A1Q86Y22 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
COL23A1Q86Y22 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL23A1Q86Y22 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL23A1Q86Y22 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC20.94■□□□□ 0.94
COL23A1Q86Y22 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC20.94■□□□□ 0.94
COL23A1Q86Y22 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL23A1Q86Y22 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL23A1Q86Y22 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC20.94■□□□□ 0.94
COL23A1Q86Y22 FTH1-202ENST00000526640 786 ntTSL 2 BASIC20.94■□□□□ 0.94
COL23A1Q86Y22 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
COL23A1Q86Y22 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC20.94■□□□□ 0.94
COL23A1Q86Y22 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC20.94■□□□□ 0.94
COL23A1Q86Y22 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC20.94■□□□□ 0.94
COL23A1Q86Y22 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC20.94■□□□□ 0.94
COL23A1Q86Y22 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC20.94■□□□□ 0.94
COL23A1Q86Y22 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL23A1Q86Y22 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL23A1Q86Y22 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.94■□□□□ 0.94
COL23A1Q86Y22 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.94■□□□□ 0.94
COL23A1Q86Y22 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL23A1Q86Y22 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL23A1Q86Y22 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL23A1Q86Y22 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
COL23A1Q86Y22 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL23A1Q86Y22 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
COL23A1Q86Y22 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL23A1Q86Y22 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
COL23A1Q86Y22 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL23A1Q86Y22 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC20.93■□□□□ 0.94
COL23A1Q86Y22 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
COL23A1Q86Y22 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC20.93■□□□□ 0.94
COL23A1Q86Y22 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
COL23A1Q86Y22 AC092933.1-201ENST00000393644 945 ntBASIC20.93■□□□□ 0.94
COL23A1Q86Y22 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC20.93■□□□□ 0.94
COL23A1Q86Y22 BCYRN1-201ENST00000418539 200 ntBASIC20.93■□□□□ 0.94
COL23A1Q86Y22 MEP1AP4-201ENST00000423244 1087 ntBASIC20.93■□□□□ 0.94
COL23A1Q86Y22 GALT-202ENST00000450095 1280 ntTSL 2 BASIC20.93■□□□□ 0.94
COL23A1Q86Y22 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC20.93■□□□□ 0.94
COL23A1Q86Y22 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC20.93■□□□□ 0.94
COL23A1Q86Y22 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC20.93■□□□□ 0.94
COL23A1Q86Y22 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC20.93■□□□□ 0.94
COL23A1Q86Y22 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL23A1Q86Y22 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COL23A1Q86Y22 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
COL23A1Q86Y22 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL23A1Q86Y22 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
COL23A1Q86Y22 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
COL23A1Q86Y22 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
COL23A1Q86Y22 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COL23A1Q86Y22 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL23A1Q86Y22 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL23A1Q86Y22 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL23A1Q86Y22 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL23A1Q86Y22 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL23A1Q86Y22 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC20.92■□□□□ 0.94
COL23A1Q86Y22 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC20.92■□□□□ 0.94
COL23A1Q86Y22 SLC25A1P3-201ENST00000395415 828 ntBASIC20.92■□□□□ 0.94
COL23A1Q86Y22 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC20.92■□□□□ 0.94
COL23A1Q86Y22 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC20.92■□□□□ 0.94
COL23A1Q86Y22 AL583810.1-201ENST00000553344 1045 ntBASIC20.92■□□□□ 0.94
COL23A1Q86Y22 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC20.92■□□□□ 0.94
COL23A1Q86Y22 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC20.92■□□□□ 0.94
COL23A1Q86Y22 AL033527.5-202ENST00000641632 1098 ntBASIC20.92■□□□□ 0.94
COL23A1Q86Y22 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
COL23A1Q86Y22 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL23A1Q86Y22 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
COL23A1Q86Y22 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC20.92■□□□□ 0.94
COL23A1Q86Y22 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL23A1Q86Y22 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL23A1Q86Y22 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC20.92■□□□□ 0.94
COL23A1Q86Y22 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL23A1Q86Y22 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC20.92■□□□□ 0.94
COL23A1Q86Y22 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
COL23A1Q86Y22 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.92■□□□□ 0.94
COL23A1Q86Y22 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.92■□□□□ 0.94
COL23A1Q86Y22 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL23A1Q86Y22 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL23A1Q86Y22 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL23A1Q86Y22 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL23A1Q86Y22 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL23A1Q86Y22 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC20.91■□□□□ 0.94
COL23A1Q86Y22 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
COL23A1Q86Y22 CD74-212ENST00000524315 584 ntTSL 5 BASIC20.91■□□□□ 0.94
COL23A1Q86Y22 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL23A1Q86Y22 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC20.91■□□□□ 0.94
COL23A1Q86Y22 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms