Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.47■□□□□ 0.71
OTOP1Q7RTM1 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC19.47■□□□□ 0.71
OTOP1Q7RTM1 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
OTOP1Q7RTM1 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
OTOP1Q7RTM1 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC19.47■□□□□ 0.71
OTOP1Q7RTM1 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC19.47■□□□□ 0.71
OTOP1Q7RTM1 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.47■□□□□ 0.71
OTOP1Q7RTM1 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
OTOP1Q7RTM1 AC016396.2-201ENST00000562575 1417 ntBASIC19.47■□□□□ 0.71
OTOP1Q7RTM1 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
OTOP1Q7RTM1 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
OTOP1Q7RTM1 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
OTOP1Q7RTM1 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
OTOP1Q7RTM1 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
OTOP1Q7RTM1 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
OTOP1Q7RTM1 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
OTOP1Q7RTM1 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
OTOP1Q7RTM1 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
OTOP1Q7RTM1 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
OTOP1Q7RTM1 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.46■□□□□ 0.71
OTOP1Q7RTM1 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.46■□□□□ 0.71
OTOP1Q7RTM1 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
OTOP1Q7RTM1 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.46■□□□□ 0.71
OTOP1Q7RTM1 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
OTOP1Q7RTM1 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
OTOP1Q7RTM1 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
OTOP1Q7RTM1 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
OTOP1Q7RTM1 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
OTOP1Q7RTM1 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
OTOP1Q7RTM1 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
OTOP1Q7RTM1 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
OTOP1Q7RTM1 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
OTOP1Q7RTM1 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.46■□□□□ 0.71
OTOP1Q7RTM1 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
OTOP1Q7RTM1 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC19.46■□□□□ 0.71
OTOP1Q7RTM1 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.46■□□□□ 0.71
OTOP1Q7RTM1 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC19.46■□□□□ 0.71
OTOP1Q7RTM1 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.46■□□□□ 0.71
OTOP1Q7RTM1 NOP2-211ENST00000540228 668 ntTSL 2 BASIC19.46■□□□□ 0.71
OTOP1Q7RTM1 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC19.46■□□□□ 0.71
OTOP1Q7RTM1 AL132655.2-201ENST00000596276 594 ntBASIC19.46■□□□□ 0.71
OTOP1Q7RTM1 AL009183.1-201ENST00000603760 355 ntBASIC19.46■□□□□ 0.71
OTOP1Q7RTM1 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
OTOP1Q7RTM1 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
OTOP1Q7RTM1 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.46■□□□□ 0.71
OTOP1Q7RTM1 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
OTOP1Q7RTM1 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
OTOP1Q7RTM1 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
OTOP1Q7RTM1 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
OTOP1Q7RTM1 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
OTOP1Q7RTM1 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
OTOP1Q7RTM1 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
OTOP1Q7RTM1 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
OTOP1Q7RTM1 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
OTOP1Q7RTM1 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
OTOP1Q7RTM1 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
OTOP1Q7RTM1 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.45■□□□□ 0.7
OTOP1Q7RTM1 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
OTOP1Q7RTM1 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
OTOP1Q7RTM1 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
OTOP1Q7RTM1 AP000842.3-202ENST00000569238 1080 ntBASIC19.45■□□□□ 0.7
OTOP1Q7RTM1 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
OTOP1Q7RTM1 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
OTOP1Q7RTM1 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
OTOP1Q7RTM1 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
OTOP1Q7RTM1 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
OTOP1Q7RTM1 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
OTOP1Q7RTM1 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
OTOP1Q7RTM1 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
OTOP1Q7RTM1 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
OTOP1Q7RTM1 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
OTOP1Q7RTM1 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.45■□□□□ 0.7
OTOP1Q7RTM1 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
OTOP1Q7RTM1 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
OTOP1Q7RTM1 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
OTOP1Q7RTM1 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.44■□□□□ 0.7
OTOP1Q7RTM1 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
OTOP1Q7RTM1 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.44■□□□□ 0.7
OTOP1Q7RTM1 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
OTOP1Q7RTM1 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.44■□□□□ 0.7
OTOP1Q7RTM1 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
OTOP1Q7RTM1 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
OTOP1Q7RTM1 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.44■□□□□ 0.7
OTOP1Q7RTM1 REEP4-207ENST00000523293 913 ntTSL 3 BASIC19.44■□□□□ 0.7
OTOP1Q7RTM1 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.44■□□□□ 0.7
OTOP1Q7RTM1 Six3os1_5.1-201ENST00000611000 271 ntBASIC19.44■□□□□ 0.7
OTOP1Q7RTM1 IGHV3-72-202ENST00000621503 303 ntBASIC19.44■□□□□ 0.7
OTOP1Q7RTM1 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.44■□□□□ 0.7
OTOP1Q7RTM1 PCDHB18P-201ENST00000524813 2368 ntBASIC19.44■□□□□ 0.7
OTOP1Q7RTM1 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
OTOP1Q7RTM1 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.44■□□□□ 0.7
OTOP1Q7RTM1 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
OTOP1Q7RTM1 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
OTOP1Q7RTM1 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
OTOP1Q7RTM1 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
OTOP1Q7RTM1 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
OTOP1Q7RTM1 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
OTOP1Q7RTM1 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
OTOP1Q7RTM1 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
OTOP1Q7RTM1 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms