Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
C11orf88Q6PI97 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
C11orf88Q6PI97 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
C11orf88Q6PI97 KRT18P23-201ENST00000435622 1283 ntBASIC14.84□□□□□ -0.03
C11orf88Q6PI97 AC112907.2-201ENST00000448639 330 ntBASIC14.84□□□□□ -0.03
C11orf88Q6PI97 CD81-212ENST00000526072 1172 ntTSL 5 BASIC14.84□□□□□ -0.03
C11orf88Q6PI97 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
C11orf88Q6PI97 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC14.84□□□□□ -0.03
C11orf88Q6PI97 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC14.84□□□□□ -0.03
C11orf88Q6PI97 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC14.84□□□□□ -0.03
C11orf88Q6PI97 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.84□□□□□ -0.03
C11orf88Q6PI97 FGF14-AS2-201ENST00000606448 1074 ntBASIC14.84□□□□□ -0.03
C11orf88Q6PI97 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.84□□□□□ -0.03
C11orf88Q6PI97 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.84□□□□□ -0.03
C11orf88Q6PI97 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
C11orf88Q6PI97 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
C11orf88Q6PI97 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.84□□□□□ -0.03
C11orf88Q6PI97 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC14.84□□□□□ -0.03
C11orf88Q6PI97 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
C11orf88Q6PI97 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
C11orf88Q6PI97 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC14.84□□□□□ -0.03
C11orf88Q6PI97 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC14.84□□□□□ -0.03
C11orf88Q6PI97 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.84□□□□□ -0.03
C11orf88Q6PI97 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
C11orf88Q6PI97 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
C11orf88Q6PI97 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC14.84□□□□□ -0.03
C11orf88Q6PI97 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
C11orf88Q6PI97 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
C11orf88Q6PI97 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
C11orf88Q6PI97 AC016396.2-201ENST00000562575 1417 ntBASIC14.83□□□□□ -0.03
C11orf88Q6PI97 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
C11orf88Q6PI97 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
C11orf88Q6PI97 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
C11orf88Q6PI97 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
C11orf88Q6PI97 AC007950.2-201ENST00000615045 2347 ntBASIC14.83□□□□□ -0.03
C11orf88Q6PI97 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
C11orf88Q6PI97 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
C11orf88Q6PI97 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
C11orf88Q6PI97 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
C11orf88Q6PI97 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
C11orf88Q6PI97 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
C11orf88Q6PI97 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
C11orf88Q6PI97 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
C11orf88Q6PI97 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC14.83□□□□□ -0.04
C11orf88Q6PI97 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
C11orf88Q6PI97 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
C11orf88Q6PI97 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC14.83□□□□□ -0.04
C11orf88Q6PI97 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC14.83□□□□□ -0.04
C11orf88Q6PI97 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC14.83□□□□□ -0.04
C11orf88Q6PI97 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC14.83□□□□□ -0.04
C11orf88Q6PI97 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.83□□□□□ -0.04
C11orf88Q6PI97 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC14.83□□□□□ -0.04
C11orf88Q6PI97 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.83□□□□□ -0.04
C11orf88Q6PI97 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC14.83□□□□□ -0.04
C11orf88Q6PI97 GCSHP2-201ENST00000560971 527 ntBASIC14.83□□□□□ -0.04
C11orf88Q6PI97 NAT14-202ENST00000587400 416 ntTSL 5 BASIC14.83□□□□□ -0.04
C11orf88Q6PI97 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
C11orf88Q6PI97 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
C11orf88Q6PI97 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.83□□□□□ -0.04
C11orf88Q6PI97 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
C11orf88Q6PI97 AC005332.1-201ENST00000577698 1310 ntBASIC14.83□□□□□ -0.04
C11orf88Q6PI97 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
C11orf88Q6PI97 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
C11orf88Q6PI97 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
C11orf88Q6PI97 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
C11orf88Q6PI97 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC14.83□□□□□ -0.04
C11orf88Q6PI97 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
C11orf88Q6PI97 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.83□□□□□ -0.04
C11orf88Q6PI97 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
C11orf88Q6PI97 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
C11orf88Q6PI97 LINC01311-201ENST00000565162 1445 ntBASIC14.83□□□□□ -0.04
C11orf88Q6PI97 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC14.83□□□□□ -0.04
C11orf88Q6PI97 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
C11orf88Q6PI97 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
C11orf88Q6PI97 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
C11orf88Q6PI97 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
C11orf88Q6PI97 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
C11orf88Q6PI97 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.82□□□□□ -0.04
C11orf88Q6PI97 MYO15B-237ENST00000642007 4893 ntBASIC14.82□□□□□ -0.04
C11orf88Q6PI97 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
C11orf88Q6PI97 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
C11orf88Q6PI97 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
C11orf88Q6PI97 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
C11orf88Q6PI97 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
C11orf88Q6PI97 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.82□□□□□ -0.04
C11orf88Q6PI97 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC14.82□□□□□ -0.04
C11orf88Q6PI97 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
C11orf88Q6PI97 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC14.82□□□□□ -0.04
C11orf88Q6PI97 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC14.82□□□□□ -0.04
C11orf88Q6PI97 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC14.82□□□□□ -0.04
C11orf88Q6PI97 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
C11orf88Q6PI97 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
C11orf88Q6PI97 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
C11orf88Q6PI97 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
C11orf88Q6PI97 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
C11orf88Q6PI97 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
C11orf88Q6PI97 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
C11orf88Q6PI97 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
C11orf88Q6PI97 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
C11orf88Q6PI97 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms