Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC27A1Q6PCB7 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.22■□□□□ 0.51
SLC27A1Q6PCB7 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SLC27A1Q6PCB7 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC27A1Q6PCB7 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.22■□□□□ 0.51
SLC27A1Q6PCB7 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.22■□□□□ 0.51
SLC27A1Q6PCB7 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.22■□□□□ 0.51
SLC27A1Q6PCB7 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.22■□□□□ 0.51
SLC27A1Q6PCB7 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.22■□□□□ 0.51
SLC27A1Q6PCB7 SPCS2P4-201ENST00000436160 681 ntBASIC18.22■□□□□ 0.51
SLC27A1Q6PCB7 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLC27A1Q6PCB7 HLA-J-203ENST00000494367 1087 ntBASIC18.22■□□□□ 0.51
SLC27A1Q6PCB7 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.22■□□□□ 0.51
SLC27A1Q6PCB7 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.22■□□□□ 0.51
SLC27A1Q6PCB7 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.22■□□□□ 0.51
SLC27A1Q6PCB7 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.22■□□□□ 0.51
SLC27A1Q6PCB7 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLC27A1Q6PCB7 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
SLC27A1Q6PCB7 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SLC27A1Q6PCB7 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.22■□□□□ 0.51
SLC27A1Q6PCB7 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC27A1Q6PCB7 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLC27A1Q6PCB7 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC27A1Q6PCB7 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.22■□□□□ 0.51
SLC27A1Q6PCB7 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.22■□□□□ 0.51
SLC27A1Q6PCB7 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC27A1Q6PCB7 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC27A1Q6PCB7 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC27A1Q6PCB7 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC27A1Q6PCB7 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
SLC27A1Q6PCB7 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC27A1Q6PCB7 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SLC27A1Q6PCB7 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC27A1Q6PCB7 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC27A1Q6PCB7 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.21■□□□□ 0.51
SLC27A1Q6PCB7 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.21■□□□□ 0.51
SLC27A1Q6PCB7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SLC27A1Q6PCB7 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC27A1Q6PCB7 LINC00895-201ENST00000629028 1637 ntBASIC18.21■□□□□ 0.51
SLC27A1Q6PCB7 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC27A1Q6PCB7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC27A1Q6PCB7 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC27A1Q6PCB7 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SLC27A1Q6PCB7 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC27A1Q6PCB7 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.21■□□□□ 0.51
SLC27A1Q6PCB7 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.21■□□□□ 0.51
SLC27A1Q6PCB7 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.21■□□□□ 0.51
SLC27A1Q6PCB7 AL645939.2-201ENST00000427340 991 ntBASIC18.21■□□□□ 0.51
SLC27A1Q6PCB7 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.21■□□□□ 0.51
SLC27A1Q6PCB7 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.21■□□□□ 0.51
SLC27A1Q6PCB7 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.21■□□□□ 0.51
SLC27A1Q6PCB7 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.21■□□□□ 0.51
SLC27A1Q6PCB7 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.21■□□□□ 0.51
SLC27A1Q6PCB7 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.21■□□□□ 0.51
SLC27A1Q6PCB7 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.21■□□□□ 0.51
SLC27A1Q6PCB7 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.21■□□□□ 0.51
SLC27A1Q6PCB7 PCDHB17P-201ENST00000539533 2393 ntBASIC18.21■□□□□ 0.51
SLC27A1Q6PCB7 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
SLC27A1Q6PCB7 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC27A1Q6PCB7 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC27A1Q6PCB7 AC016027.1-202ENST00000607927 1699 ntBASIC18.21■□□□□ 0.51
SLC27A1Q6PCB7 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.21■□□□□ 0.51
SLC27A1Q6PCB7 AL645608.8-201ENST00000606034 2086 ntBASIC18.21■□□□□ 0.51
SLC27A1Q6PCB7 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.21■□□□□ 0.51
SLC27A1Q6PCB7 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.21■□□□□ 0.5
SLC27A1Q6PCB7 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.21■□□□□ 0.5
SLC27A1Q6PCB7 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.2■□□□□ 0.5
SLC27A1Q6PCB7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC27A1Q6PCB7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC27A1Q6PCB7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC27A1Q6PCB7 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC27A1Q6PCB7 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC27A1Q6PCB7 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC27A1Q6PCB7 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC27A1Q6PCB7 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC27A1Q6PCB7 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC27A1Q6PCB7 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC27A1Q6PCB7 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC27A1Q6PCB7 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC27A1Q6PCB7 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
SLC27A1Q6PCB7 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC27A1Q6PCB7 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
SLC27A1Q6PCB7 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC27A1Q6PCB7 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.2■□□□□ 0.5
SLC27A1Q6PCB7 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.2■□□□□ 0.5
SLC27A1Q6PCB7 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.2■□□□□ 0.5
SLC27A1Q6PCB7 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC27A1Q6PCB7 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.2■□□□□ 0.5
SLC27A1Q6PCB7 AC069335.1-201ENST00000489972 472 ntBASIC18.2■□□□□ 0.5
SLC27A1Q6PCB7 IGHV3-62-201ENST00000520057 340 ntBASIC18.2■□□□□ 0.5
SLC27A1Q6PCB7 RFPL4AP1-201ENST00000530883 850 ntBASIC18.2■□□□□ 0.5
SLC27A1Q6PCB7 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
SLC27A1Q6PCB7 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
SLC27A1Q6PCB7 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.2■□□□□ 0.5
SLC27A1Q6PCB7 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
SLC27A1Q6PCB7 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.2■□□□□ 0.5
SLC27A1Q6PCB7 KRT8P23-201ENST00000560090 1207 ntBASIC18.2■□□□□ 0.5
SLC27A1Q6PCB7 AC004449.1-201ENST00000564240 433 ntBASIC18.2■□□□□ 0.5
SLC27A1Q6PCB7 AC093028.1-201ENST00000622998 982 ntBASIC18.2■□□□□ 0.5
SLC27A1Q6PCB7 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms