Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.98■□□□□ 0.15
LPCAT4Q643R3 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LPCAT4Q643R3 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
LPCAT4Q643R3 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
LPCAT4Q643R3 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LPCAT4Q643R3 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LPCAT4Q643R3 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
LPCAT4Q643R3 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LPCAT4Q643R3 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.98■□□□□ 0.15
LPCAT4Q643R3 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
LPCAT4Q643R3 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LPCAT4Q643R3 CICP13-201ENST00000422015 2789 ntBASIC15.98■□□□□ 0.15
LPCAT4Q643R3 TSPY17P-201ENST00000450329 467 ntBASIC15.98■□□□□ 0.15
LPCAT4Q643R3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LPCAT4Q643R3 ADM-205ENST00000528544 586 ntTSL 2 BASIC15.98■□□□□ 0.15
LPCAT4Q643R3 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.98■□□□□ 0.15
LPCAT4Q643R3 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.98■□□□□ 0.15
LPCAT4Q643R3 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LPCAT4Q643R3 AC009154.2-201ENST00000621177 724 ntBASIC15.98■□□□□ 0.15
LPCAT4Q643R3 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LPCAT4Q643R3 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LPCAT4Q643R3 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LPCAT4Q643R3 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
LPCAT4Q643R3 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.98■□□□□ 0.15
LPCAT4Q643R3 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LPCAT4Q643R3 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LPCAT4Q643R3 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LPCAT4Q643R3 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LPCAT4Q643R3 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
LPCAT4Q643R3 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
LPCAT4Q643R3 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
LPCAT4Q643R3 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.98■□□□□ 0.15
LPCAT4Q643R3 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LPCAT4Q643R3 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LPCAT4Q643R3 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LPCAT4Q643R3 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LPCAT4Q643R3 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.97■□□□□ 0.15
LPCAT4Q643R3 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LPCAT4Q643R3 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LPCAT4Q643R3 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LPCAT4Q643R3 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
LPCAT4Q643R3 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LPCAT4Q643R3 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC15.97■□□□□ 0.15
LPCAT4Q643R3 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
LPCAT4Q643R3 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
LPCAT4Q643R3 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LPCAT4Q643R3 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
LPCAT4Q643R3 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LPCAT4Q643R3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
LPCAT4Q643R3 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LPCAT4Q643R3 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
LPCAT4Q643R3 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
LPCAT4Q643R3 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
LPCAT4Q643R3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.97■□□□□ 0.15
LPCAT4Q643R3 AC128676.1-201ENST00000454392 318 ntBASIC15.97■□□□□ 0.15
LPCAT4Q643R3 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
LPCAT4Q643R3 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.97■□□□□ 0.15
LPCAT4Q643R3 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC15.97■□□□□ 0.15
LPCAT4Q643R3 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.97■□□□□ 0.15
LPCAT4Q643R3 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC15.97■□□□□ 0.15
LPCAT4Q643R3 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.97■□□□□ 0.15
LPCAT4Q643R3 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.97■□□□□ 0.15
LPCAT4Q643R3 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.97■□□□□ 0.15
LPCAT4Q643R3 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
LPCAT4Q643R3 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LPCAT4Q643R3 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
LPCAT4Q643R3 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.97■□□□□ 0.15
LPCAT4Q643R3 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LPCAT4Q643R3 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LPCAT4Q643R3 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LPCAT4Q643R3 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LPCAT4Q643R3 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.97■□□□□ 0.15
LPCAT4Q643R3 AC138035.3-201ENST00000622706 2791 ntBASIC15.97■□□□□ 0.15
LPCAT4Q643R3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LPCAT4Q643R3 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LPCAT4Q643R3 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LPCAT4Q643R3 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.97■□□□□ 0.15
LPCAT4Q643R3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
LPCAT4Q643R3 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LPCAT4Q643R3 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
LPCAT4Q643R3 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LPCAT4Q643R3 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LPCAT4Q643R3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.96■□□□□ 0.15
LPCAT4Q643R3 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LPCAT4Q643R3 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LPCAT4Q643R3 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.96■□□□□ 0.15
LPCAT4Q643R3 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LPCAT4Q643R3 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LPCAT4Q643R3 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.96■□□□□ 0.15
LPCAT4Q643R3 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.96■□□□□ 0.15
LPCAT4Q643R3 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
LPCAT4Q643R3 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.96■□□□□ 0.15
LPCAT4Q643R3 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
LPCAT4Q643R3 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LPCAT4Q643R3 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.96■□□□□ 0.15
LPCAT4Q643R3 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
LPCAT4Q643R3 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LPCAT4Q643R3 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LPCAT4Q643R3 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC15.96■□□□□ 0.15
LPCAT4Q643R3 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms