Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TTC39BQ5VTQ0 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TTC39BQ5VTQ0 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TTC39BQ5VTQ0 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.64■□□□□ 0.41
TTC39BQ5VTQ0 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
TTC39BQ5VTQ0 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.64■□□□□ 0.41
TTC39BQ5VTQ0 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TTC39BQ5VTQ0 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.64■□□□□ 0.41
TTC39BQ5VTQ0 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TTC39BQ5VTQ0 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TTC39BQ5VTQ0 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.63■□□□□ 0.41
TTC39BQ5VTQ0 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TTC39BQ5VTQ0 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TTC39BQ5VTQ0 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TTC39BQ5VTQ0 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TTC39BQ5VTQ0 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TTC39BQ5VTQ0 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TTC39BQ5VTQ0 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TTC39BQ5VTQ0 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TTC39BQ5VTQ0 AC105020.1-201ENST00000435356 2205 ntBASIC17.63■□□□□ 0.41
TTC39BQ5VTQ0 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.63■□□□□ 0.41
TTC39BQ5VTQ0 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TTC39BQ5VTQ0 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TTC39BQ5VTQ0 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TTC39BQ5VTQ0 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TTC39BQ5VTQ0 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TTC39BQ5VTQ0 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
TTC39BQ5VTQ0 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
TTC39BQ5VTQ0 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
TTC39BQ5VTQ0 CRYGEP-201ENST00000412192 528 ntBASIC17.63■□□□□ 0.41
TTC39BQ5VTQ0 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.63■□□□□ 0.41
TTC39BQ5VTQ0 RNA5SP416-201ENST00000516838 111 ntBASIC17.63■□□□□ 0.41
TTC39BQ5VTQ0 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.63■□□□□ 0.41
TTC39BQ5VTQ0 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TTC39BQ5VTQ0 AL671883.3-201ENST00000603274 991 ntBASIC17.63■□□□□ 0.41
TTC39BQ5VTQ0 AC140113.2-201ENST00000604370 208 ntBASIC17.63■□□□□ 0.41
TTC39BQ5VTQ0 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TTC39BQ5VTQ0 AC004790.2-201ENST00000623588 572 ntBASIC17.63■□□□□ 0.41
TTC39BQ5VTQ0 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TTC39BQ5VTQ0 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TTC39BQ5VTQ0 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TTC39BQ5VTQ0 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TTC39BQ5VTQ0 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TTC39BQ5VTQ0 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TTC39BQ5VTQ0 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TTC39BQ5VTQ0 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.63■□□□□ 0.41
TTC39BQ5VTQ0 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TTC39BQ5VTQ0 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TTC39BQ5VTQ0 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TTC39BQ5VTQ0 PCDHA14-201ENST00000506751 2298 ntBASIC17.63■□□□□ 0.41
TTC39BQ5VTQ0 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
TTC39BQ5VTQ0 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TTC39BQ5VTQ0 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.63■□□□□ 0.41
TTC39BQ5VTQ0 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TTC39BQ5VTQ0 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TTC39BQ5VTQ0 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TTC39BQ5VTQ0 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.62■□□□□ 0.41
TTC39BQ5VTQ0 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TTC39BQ5VTQ0 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
TTC39BQ5VTQ0 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
TTC39BQ5VTQ0 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TTC39BQ5VTQ0 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.62■□□□□ 0.41
TTC39BQ5VTQ0 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
TTC39BQ5VTQ0 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.62■□□□□ 0.41
TTC39BQ5VTQ0 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.62■□□□□ 0.41
TTC39BQ5VTQ0 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
TTC39BQ5VTQ0 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TTC39BQ5VTQ0 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
TTC39BQ5VTQ0 SLC25A1P3-201ENST00000395415 828 ntBASIC17.62■□□□□ 0.41
TTC39BQ5VTQ0 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TTC39BQ5VTQ0 VN2R19P-201ENST00000442399 1052 ntBASIC17.62■□□□□ 0.41
TTC39BQ5VTQ0 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TTC39BQ5VTQ0 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.62■□□□□ 0.41
TTC39BQ5VTQ0 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.62■□□□□ 0.41
TTC39BQ5VTQ0 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.62■□□□□ 0.41
TTC39BQ5VTQ0 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TTC39BQ5VTQ0 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.62■□□□□ 0.41
TTC39BQ5VTQ0 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.62■□□□□ 0.41
TTC39BQ5VTQ0 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.62■□□□□ 0.41
TTC39BQ5VTQ0 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TTC39BQ5VTQ0 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TTC39BQ5VTQ0 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
TTC39BQ5VTQ0 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TTC39BQ5VTQ0 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TTC39BQ5VTQ0 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TTC39BQ5VTQ0 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TTC39BQ5VTQ0 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TTC39BQ5VTQ0 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TTC39BQ5VTQ0 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TTC39BQ5VTQ0 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TTC39BQ5VTQ0 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TTC39BQ5VTQ0 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.61■□□□□ 0.41
TTC39BQ5VTQ0 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TTC39BQ5VTQ0 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TTC39BQ5VTQ0 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TTC39BQ5VTQ0 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TTC39BQ5VTQ0 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.61■□□□□ 0.41
TTC39BQ5VTQ0 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TTC39BQ5VTQ0 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TTC39BQ5VTQ0 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms