Protein–RNA interactions for Protein: Q56A73

SPIN4, Spindlin-4, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN4Q56A73 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SPIN4Q56A73 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SPIN4Q56A73 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.16■□□□□ 0.18
SPIN4Q56A73 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPIN4Q56A73 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPIN4Q56A73 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.16■□□□□ 0.18
SPIN4Q56A73 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.16■□□□□ 0.18
SPIN4Q56A73 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPIN4Q56A73 AC006277.1-201ENST00000624348 1610 ntBASIC16.16■□□□□ 0.18
SPIN4Q56A73 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPIN4Q56A73 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
SPIN4Q56A73 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
SPIN4Q56A73 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SPIN4Q56A73 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SPIN4Q56A73 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SPIN4Q56A73 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPIN4Q56A73 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPIN4Q56A73 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.16■□□□□ 0.18
SPIN4Q56A73 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPIN4Q56A73 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SPIN4Q56A73 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
SPIN4Q56A73 AL805961.1-202ENST00000641562 540 ntBASIC16.16■□□□□ 0.18
SPIN4Q56A73 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.16■□□□□ 0.18
SPIN4Q56A73 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.16■□□□□ 0.18
SPIN4Q56A73 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.16■□□□□ 0.18
SPIN4Q56A73 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.16■□□□□ 0.18
SPIN4Q56A73 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPIN4Q56A73 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.16■□□□□ 0.18
SPIN4Q56A73 AC006538.1-201ENST00000567905 1585 ntBASIC16.16■□□□□ 0.18
SPIN4Q56A73 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.16■□□□□ 0.18
SPIN4Q56A73 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SPIN4Q56A73 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SPIN4Q56A73 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.16■□□□□ 0.18
SPIN4Q56A73 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.16■□□□□ 0.18
SPIN4Q56A73 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPIN4Q56A73 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
SPIN4Q56A73 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPIN4Q56A73 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPIN4Q56A73 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.15■□□□□ 0.18
SPIN4Q56A73 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SPIN4Q56A73 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SPIN4Q56A73 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.15■□□□□ 0.18
SPIN4Q56A73 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SPIN4Q56A73 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPIN4Q56A73 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
SPIN4Q56A73 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPIN4Q56A73 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.15■□□□□ 0.18
SPIN4Q56A73 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.15■□□□□ 0.18
SPIN4Q56A73 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SPIN4Q56A73 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPIN4Q56A73 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.15■□□□□ 0.18
SPIN4Q56A73 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SPIN4Q56A73 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SPIN4Q56A73 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SPIN4Q56A73 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.15■□□□□ 0.18
SPIN4Q56A73 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SPIN4Q56A73 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.15■□□□□ 0.18
SPIN4Q56A73 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPIN4Q56A73 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.15■□□□□ 0.18
SPIN4Q56A73 AF238378.1-201ENST00000526806 358 ntBASIC16.15■□□□□ 0.18
SPIN4Q56A73 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SPIN4Q56A73 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.15■□□□□ 0.18
SPIN4Q56A73 AC021087.4-201ENST00000563761 564 ntBASIC16.15■□□□□ 0.18
SPIN4Q56A73 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
SPIN4Q56A73 CLEC4GP1-201ENST00000596555 870 ntBASIC16.15■□□□□ 0.18
SPIN4Q56A73 IFNL4P1-201ENST00000607083 540 ntBASIC16.15■□□□□ 0.18
SPIN4Q56A73 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
SPIN4Q56A73 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
SPIN4Q56A73 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SPIN4Q56A73 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SPIN4Q56A73 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SPIN4Q56A73 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
SPIN4Q56A73 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPIN4Q56A73 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SPIN4Q56A73 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPIN4Q56A73 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SPIN4Q56A73 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPIN4Q56A73 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.15■□□□□ 0.18
SPIN4Q56A73 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.15■□□□□ 0.18
SPIN4Q56A73 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SPIN4Q56A73 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SPIN4Q56A73 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
SPIN4Q56A73 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
SPIN4Q56A73 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.14■□□□□ 0.18
SPIN4Q56A73 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
SPIN4Q56A73 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPIN4Q56A73 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SPIN4Q56A73 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.14■□□□□ 0.17
SPIN4Q56A73 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPIN4Q56A73 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SPIN4Q56A73 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPIN4Q56A73 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPIN4Q56A73 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPIN4Q56A73 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPIN4Q56A73 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SPIN4Q56A73 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPIN4Q56A73 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.14■□□□□ 0.17
SPIN4Q56A73 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPIN4Q56A73 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPIN4Q56A73 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms