Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 AC034232.1-201ENST00000506026 1064 ntBASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 TK2-213ENST00000563369 882 ntTSL 5 BASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 CD81-212ENST00000526072 1172 ntTSL 5 BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 GCSHP2-201ENST00000560971 527 ntBASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 ANKRD20A8P-203ENST00000641373 517 ntBASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 TUBB8P12-201ENST00000308911 1335 ntBASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 TUBB7P-202ENST00000428444 1305 ntBASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 TUBB8P7-204ENST00000567960 1332 ntBASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
ANKRD55Q3KP44 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
ANKRD55Q3KP44 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
ANKRD55Q3KP44 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms