Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RSPO4Q2I0M5 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.27■□□□□ 0.19
RSPO4Q2I0M5 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RSPO4Q2I0M5 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RSPO4Q2I0M5 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RSPO4Q2I0M5 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RSPO4Q2I0M5 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RSPO4Q2I0M5 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.26■□□□□ 0.19
RSPO4Q2I0M5 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RSPO4Q2I0M5 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RSPO4Q2I0M5 AC046185.3-201ENST00000623228 1824 ntBASIC16.26■□□□□ 0.19
RSPO4Q2I0M5 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RSPO4Q2I0M5 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RSPO4Q2I0M5 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.26■□□□□ 0.19
RSPO4Q2I0M5 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RSPO4Q2I0M5 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.26■□□□□ 0.19
RSPO4Q2I0M5 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RSPO4Q2I0M5 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.26■□□□□ 0.19
RSPO4Q2I0M5 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RSPO4Q2I0M5 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
RSPO4Q2I0M5 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RSPO4Q2I0M5 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RSPO4Q2I0M5 RNU1-129P-201ENST00000384064 167 ntBASIC16.26■□□□□ 0.19
RSPO4Q2I0M5 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.26■□□□□ 0.19
RSPO4Q2I0M5 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.26■□□□□ 0.19
RSPO4Q2I0M5 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
RSPO4Q2I0M5 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.26■□□□□ 0.19
RSPO4Q2I0M5 ELK1P1-201ENST00000485699 580 ntBASIC16.26■□□□□ 0.19
RSPO4Q2I0M5 RNA5SP423-201ENST00000517127 109 ntBASIC16.26■□□□□ 0.19
RSPO4Q2I0M5 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.26■□□□□ 0.19
RSPO4Q2I0M5 U1.21-201ENST00000580816 167 ntBASIC16.26■□□□□ 0.19
RSPO4Q2I0M5 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.26■□□□□ 0.19
RSPO4Q2I0M5 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RSPO4Q2I0M5 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RSPO4Q2I0M5 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
RSPO4Q2I0M5 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.26■□□□□ 0.19
RSPO4Q2I0M5 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
RSPO4Q2I0M5 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RSPO4Q2I0M5 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RSPO4Q2I0M5 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RSPO4Q2I0M5 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RSPO4Q2I0M5 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
RSPO4Q2I0M5 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RSPO4Q2I0M5 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RSPO4Q2I0M5 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RSPO4Q2I0M5 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.25■□□□□ 0.19
RSPO4Q2I0M5 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.25■□□□□ 0.19
RSPO4Q2I0M5 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
RSPO4Q2I0M5 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
RSPO4Q2I0M5 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RSPO4Q2I0M5 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.25■□□□□ 0.19
RSPO4Q2I0M5 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.25■□□□□ 0.19
RSPO4Q2I0M5 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RSPO4Q2I0M5 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.25■□□□□ 0.19
RSPO4Q2I0M5 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.25■□□□□ 0.19
RSPO4Q2I0M5 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RSPO4Q2I0M5 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RSPO4Q2I0M5 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RSPO4Q2I0M5 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RSPO4Q2I0M5 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RSPO4Q2I0M5 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.25■□□□□ 0.19
RSPO4Q2I0M5 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RSPO4Q2I0M5 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
RSPO4Q2I0M5 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.25■□□□□ 0.19
RSPO4Q2I0M5 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.25■□□□□ 0.19
RSPO4Q2I0M5 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.25■□□□□ 0.19
RSPO4Q2I0M5 ZNF890P-202ENST00000530367 1156 ntBASIC16.25■□□□□ 0.19
RSPO4Q2I0M5 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.25■□□□□ 0.19
RSPO4Q2I0M5 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.25■□□□□ 0.19
RSPO4Q2I0M5 MIR3615-201ENST00000581999 87 ntBASIC16.25■□□□□ 0.19
RSPO4Q2I0M5 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RSPO4Q2I0M5 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RSPO4Q2I0M5 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RSPO4Q2I0M5 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RSPO4Q2I0M5 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RSPO4Q2I0M5 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.25■□□□□ 0.19
RSPO4Q2I0M5 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RSPO4Q2I0M5 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RSPO4Q2I0M5 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RSPO4Q2I0M5 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RSPO4Q2I0M5 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
RSPO4Q2I0M5 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
RSPO4Q2I0M5 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RSPO4Q2I0M5 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RSPO4Q2I0M5 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RSPO4Q2I0M5 TUBB1P2-201ENST00000422712 1306 ntBASIC16.24■□□□□ 0.19
RSPO4Q2I0M5 TUBB1P1-201ENST00000503144 1300 ntBASIC16.24■□□□□ 0.19
RSPO4Q2I0M5 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RSPO4Q2I0M5 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RSPO4Q2I0M5 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.24■□□□□ 0.19
RSPO4Q2I0M5 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RSPO4Q2I0M5 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RSPO4Q2I0M5 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RSPO4Q2I0M5 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RSPO4Q2I0M5 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RSPO4Q2I0M5 KRT43P-201ENST00000434019 910 ntBASIC16.24■□□□□ 0.19
RSPO4Q2I0M5 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.24■□□□□ 0.19
RSPO4Q2I0M5 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.24■□□□□ 0.19
RSPO4Q2I0M5 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.24■□□□□ 0.19
RSPO4Q2I0M5 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms