Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.97□□□□□ -0.01
NKX6-1P78426 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
NKX6-1P78426 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.97□□□□□ -0.01
NKX6-1P78426 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.97□□□□□ -0.01
NKX6-1P78426 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.97□□□□□ -0.01
NKX6-1P78426 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
NKX6-1P78426 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.97□□□□□ -0.01
NKX6-1P78426 AC011467.4-201ENST00000594891 528 ntBASIC14.97□□□□□ -0.01
NKX6-1P78426 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.97□□□□□ -0.01
NKX6-1P78426 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.97□□□□□ -0.01
NKX6-1P78426 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX6-1P78426 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX6-1P78426 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX6-1P78426 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NKX6-1P78426 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.97□□□□□ -0.01
NKX6-1P78426 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC14.97□□□□□ -0.01
NKX6-1P78426 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.97□□□□□ -0.01
NKX6-1P78426 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC14.97□□□□□ -0.01
NKX6-1P78426 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.97□□□□□ -0.01
NKX6-1P78426 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX6-1P78426 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
NKX6-1P78426 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.97□□□□□ -0.01
NKX6-1P78426 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX6-1P78426 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX6-1P78426 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX6-1P78426 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC14.96□□□□□ -0.01
NKX6-1P78426 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NKX6-1P78426 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX6-1P78426 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX6-1P78426 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.96□□□□□ -0.01
NKX6-1P78426 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX6-1P78426 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX6-1P78426 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX6-1P78426 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
NKX6-1P78426 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX6-1P78426 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX6-1P78426 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX6-1P78426 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX6-1P78426 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX6-1P78426 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
NKX6-1P78426 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX6-1P78426 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX6-1P78426 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX6-1P78426 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.96□□□□□ -0.01
NKX6-1P78426 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.96□□□□□ -0.01
NKX6-1P78426 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
NKX6-1P78426 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX6-1P78426 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.96□□□□□ -0.01
NKX6-1P78426 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.96□□□□□ -0.01
NKX6-1P78426 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.96□□□□□ -0.01
NKX6-1P78426 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NKX6-1P78426 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.96□□□□□ -0.01
NKX6-1P78426 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.96□□□□□ -0.01
NKX6-1P78426 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.96□□□□□ -0.01
NKX6-1P78426 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.96□□□□□ -0.01
NKX6-1P78426 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.96□□□□□ -0.01
NKX6-1P78426 AC004706.3-202ENST00000621574 984 ntBASIC14.96□□□□□ -0.01
NKX6-1P78426 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.96□□□□□ -0.01
NKX6-1P78426 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX6-1P78426 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX6-1P78426 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX6-1P78426 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
NKX6-1P78426 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.96□□□□□ -0.01
NKX6-1P78426 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
NKX6-1P78426 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
NKX6-1P78426 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
NKX6-1P78426 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
NKX6-1P78426 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
NKX6-1P78426 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX6-1P78426 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
NKX6-1P78426 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX6-1P78426 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX6-1P78426 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX6-1P78426 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX6-1P78426 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX6-1P78426 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.95□□□□□ -0.02
NKX6-1P78426 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX6-1P78426 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NKX6-1P78426 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
NKX6-1P78426 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX6-1P78426 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.95□□□□□ -0.02
NKX6-1P78426 AC134043.2-201ENST00000624206 2238 ntBASIC14.95□□□□□ -0.02
NKX6-1P78426 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX6-1P78426 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX6-1P78426 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NKX6-1P78426 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NKX6-1P78426 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.95□□□□□ -0.02
NKX6-1P78426 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX6-1P78426 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX6-1P78426 MIR770-201ENST00000390219 98 ntBASIC14.95□□□□□ -0.02
NKX6-1P78426 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.95□□□□□ -0.02
NKX6-1P78426 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.95□□□□□ -0.02
NKX6-1P78426 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.95□□□□□ -0.02
NKX6-1P78426 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.95□□□□□ -0.02
NKX6-1P78426 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.95□□□□□ -0.02
NKX6-1P78426 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.95□□□□□ -0.02
NKX6-1P78426 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NKX6-1P78426 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.95□□□□□ -0.02
NKX6-1P78426 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.95□□□□□ -0.02
NKX6-1P78426 AC106028.4-201ENST00000614509 607 ntBASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms