Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.11■□□□□ 0.33
PRAMEP78395 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEP78395 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEP78395 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.1■□□□□ 0.33
PRAMEP78395 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEP78395 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
PRAMEP78395 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PRAMEP78395 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.1■□□□□ 0.33
PRAMEP78395 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEP78395 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.1■□□□□ 0.33
PRAMEP78395 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEP78395 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PRAMEP78395 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.1■□□□□ 0.33
PRAMEP78395 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEP78395 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEP78395 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEP78395 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.1■□□□□ 0.33
PRAMEP78395 AKR1C7P-201ENST00000305623 895 ntBASIC17.1■□□□□ 0.33
PRAMEP78395 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEP78395 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.1■□□□□ 0.33
PRAMEP78395 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.1■□□□□ 0.33
PRAMEP78395 AC139887.3-201ENST00000568585 713 ntBASIC17.1■□□□□ 0.33
PRAMEP78395 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.1■□□□□ 0.33
PRAMEP78395 AL139424.1-201ENST00000607572 797 ntBASIC17.1■□□□□ 0.33
PRAMEP78395 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PRAMEP78395 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEP78395 AL590787.1-201ENST00000568856 1315 ntBASIC17.1■□□□□ 0.33
PRAMEP78395 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEP78395 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.1■□□□□ 0.33
PRAMEP78395 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEP78395 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEP78395 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEP78395 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEP78395 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
PRAMEP78395 CICP6-201ENST00000457191 2729 ntBASIC17.1■□□□□ 0.33
PRAMEP78395 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEP78395 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.1■□□□□ 0.33
PRAMEP78395 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.1■□□□□ 0.33
PRAMEP78395 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.1■□□□□ 0.33
PRAMEP78395 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEP78395 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEP78395 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEP78395 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
PRAMEP78395 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEP78395 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEP78395 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEP78395 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEP78395 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEP78395 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
PRAMEP78395 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEP78395 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEP78395 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEP78395 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.09■□□□□ 0.33
PRAMEP78395 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEP78395 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.09■□□□□ 0.33
PRAMEP78395 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.09■□□□□ 0.33
PRAMEP78395 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.09■□□□□ 0.33
PRAMEP78395 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.09■□□□□ 0.33
PRAMEP78395 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEP78395 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.09■□□□□ 0.33
PRAMEP78395 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PRAMEP78395 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEP78395 AGGF1P2-201ENST00000426656 2106 ntBASIC17.09■□□□□ 0.33
PRAMEP78395 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEP78395 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEP78395 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PRAMEP78395 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEP78395 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEP78395 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEP78395 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEP78395 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PRAMEP78395 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PRAMEP78395 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PRAMEP78395 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
PRAMEP78395 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
PRAMEP78395 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PRAMEP78395 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PRAMEP78395 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PRAMEP78395 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PRAMEP78395 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
PRAMEP78395 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
PRAMEP78395 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.08■□□□□ 0.32
PRAMEP78395 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEP78395 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEP78395 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
PRAMEP78395 AC243591.1-201ENST00000452967 1364 ntBASIC17.08■□□□□ 0.32
PRAMEP78395 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.08■□□□□ 0.32
PRAMEP78395 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PRAMEP78395 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEP78395 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEP78395 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEP78395 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEP78395 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEP78395 AF238378.1-201ENST00000526806 358 ntBASIC17.08■□□□□ 0.32
PRAMEP78395 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEP78395 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.08■□□□□ 0.32
PRAMEP78395 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PRAMEP78395 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEP78395 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.08■□□□□ 0.32
PRAMEP78395 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms