Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.89■□□□□ 0.61
ASIC1P78348 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.89■□□□□ 0.61
ASIC1P78348 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ASIC1P78348 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ASIC1P78348 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.89■□□□□ 0.61
ASIC1P78348 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.89■□□□□ 0.61
ASIC1P78348 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ASIC1P78348 FAM197Y8-203ENST00000450145 560 ntBASIC18.89■□□□□ 0.61
ASIC1P78348 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.89■□□□□ 0.61
ASIC1P78348 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.89■□□□□ 0.61
ASIC1P78348 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.89■□□□□ 0.61
ASIC1P78348 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
ASIC1P78348 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
ASIC1P78348 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
ASIC1P78348 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
ASIC1P78348 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
ASIC1P78348 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
ASIC1P78348 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ASIC1P78348 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
ASIC1P78348 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
ASIC1P78348 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ASIC1P78348 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ASIC1P78348 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ASIC1P78348 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ASIC1P78348 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ASIC1P78348 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ASIC1P78348 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
ASIC1P78348 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ASIC1P78348 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ASIC1P78348 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ASIC1P78348 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ASIC1P78348 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ASIC1P78348 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ASIC1P78348 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ASIC1P78348 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
ASIC1P78348 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ASIC1P78348 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ASIC1P78348 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ASIC1P78348 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.88■□□□□ 0.61
ASIC1P78348 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ASIC1P78348 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
ASIC1P78348 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ASIC1P78348 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ASIC1P78348 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ASIC1P78348 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.88■□□□□ 0.61
ASIC1P78348 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
ASIC1P78348 AC079781.3-201ENST00000449110 356 ntBASIC18.88■□□□□ 0.61
ASIC1P78348 AC087163.2-201ENST00000457299 853 ntBASIC18.88■□□□□ 0.61
ASIC1P78348 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
ASIC1P78348 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.88■□□□□ 0.61
ASIC1P78348 RN7SL510P-201ENST00000581311 263 ntBASIC18.88■□□□□ 0.61
ASIC1P78348 AL691432.3-201ENST00000621860 400 ntBASIC18.88■□□□□ 0.61
ASIC1P78348 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
ASIC1P78348 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
ASIC1P78348 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ASIC1P78348 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ASIC1P78348 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.88■□□□□ 0.61
ASIC1P78348 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.88■□□□□ 0.61
ASIC1P78348 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ASIC1P78348 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ASIC1P78348 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.88■□□□□ 0.61
ASIC1P78348 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.88■□□□□ 0.61
ASIC1P78348 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ASIC1P78348 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ASIC1P78348 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
ASIC1P78348 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ASIC1P78348 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.88■□□□□ 0.61
ASIC1P78348 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ASIC1P78348 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ASIC1P78348 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.88■□□□□ 0.61
ASIC1P78348 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ASIC1P78348 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
ASIC1P78348 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ASIC1P78348 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ASIC1P78348 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
ASIC1P78348 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ASIC1P78348 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.87■□□□□ 0.61
ASIC1P78348 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ASIC1P78348 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ASIC1P78348 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ASIC1P78348 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.87■□□□□ 0.61
ASIC1P78348 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ASIC1P78348 AL450487.1-201ENST00000426799 995 ntBASIC18.87■□□□□ 0.61
ASIC1P78348 KRT18P27-201ENST00000427733 1299 ntBASIC18.87■□□□□ 0.61
ASIC1P78348 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ASIC1P78348 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.87■□□□□ 0.61
ASIC1P78348 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ASIC1P78348 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.87■□□□□ 0.61
ASIC1P78348 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
ASIC1P78348 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ASIC1P78348 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.87■□□□□ 0.61
ASIC1P78348 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ASIC1P78348 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ASIC1P78348 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ASIC1P78348 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.86■□□□□ 0.61
ASIC1P78348 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
ASIC1P78348 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ASIC1P78348 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ASIC1P78348 HLA-A-202ENST00000376806 1854 ntBASIC18.86■□□□□ 0.61
ASIC1P78348 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms