Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.29■□□□□ 0.04
RPS4XP62701 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.29■□□□□ 0.04
RPS4XP62701 NKAPP1-205ENST00000585790 367 ntBASIC15.29■□□□□ 0.04
RPS4XP62701 AL139424.1-201ENST00000607572 797 ntBASIC15.29■□□□□ 0.04
RPS4XP62701 AL589182.2-201ENST00000619332 1049 ntBASIC15.29■□□□□ 0.04
RPS4XP62701 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.29■□□□□ 0.04
RPS4XP62701 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
RPS4XP62701 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.29■□□□□ 0.04
RPS4XP62701 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPS4XP62701 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPS4XP62701 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.29■□□□□ 0.04
RPS4XP62701 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.29■□□□□ 0.04
RPS4XP62701 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPS4XP62701 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.29■□□□□ 0.04
RPS4XP62701 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.29■□□□□ 0.04
RPS4XP62701 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.29■□□□□ 0.04
RPS4XP62701 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPS4XP62701 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPS4XP62701 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.29■□□□□ 0.04
RPS4XP62701 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
RPS4XP62701 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
RPS4XP62701 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
RPS4XP62701 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.29■□□□□ 0.04
RPS4XP62701 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.29■□□□□ 0.04
RPS4XP62701 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPS4XP62701 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPS4XP62701 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPS4XP62701 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.28■□□□□ 0.04
RPS4XP62701 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
RPS4XP62701 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPS4XP62701 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RPS4XP62701 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPS4XP62701 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPS4XP62701 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPS4XP62701 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RPS4XP62701 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.28■□□□□ 0.04
RPS4XP62701 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPS4XP62701 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPS4XP62701 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPS4XP62701 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPS4XP62701 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RPS4XP62701 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.28■□□□□ 0.04
RPS4XP62701 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
RPS4XP62701 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.28■□□□□ 0.04
RPS4XP62701 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.28■□□□□ 0.04
RPS4XP62701 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPS4XP62701 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.28■□□□□ 0.04
RPS4XP62701 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RPS4XP62701 HLA-J-202ENST00000469281 1241 ntBASIC15.28■□□□□ 0.04
RPS4XP62701 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.28■□□□□ 0.04
RPS4XP62701 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.28■□□□□ 0.04
RPS4XP62701 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RPS4XP62701 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPS4XP62701 AL049840.3-201ENST00000602669 611 ntBASIC15.28■□□□□ 0.04
RPS4XP62701 AC013467.2-201ENST00000605472 835 ntBASIC15.28■□□□□ 0.04
RPS4XP62701 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPS4XP62701 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RPS4XP62701 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPS4XP62701 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.28■□□□□ 0.04
RPS4XP62701 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPS4XP62701 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
RPS4XP62701 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RPS4XP62701 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
RPS4XP62701 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPS4XP62701 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RPS4XP62701 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RPS4XP62701 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RPS4XP62701 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.27■□□□□ 0.04
RPS4XP62701 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RPS4XP62701 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RPS4XP62701 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
RPS4XP62701 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
RPS4XP62701 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RPS4XP62701 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RPS4XP62701 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RPS4XP62701 PMS2P7-201ENST00000506558 1336 ntBASIC15.27■□□□□ 0.04
RPS4XP62701 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.27■□□□□ 0.04
RPS4XP62701 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
RPS4XP62701 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RPS4XP62701 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RPS4XP62701 POLD2P1-201ENST00000511220 997 ntBASIC15.27■□□□□ 0.04
RPS4XP62701 AC092865.5-201ENST00000545435 363 ntBASIC15.27■□□□□ 0.04
RPS4XP62701 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
RPS4XP62701 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.27■□□□□ 0.04
RPS4XP62701 AC139530.3-201ENST00000620344 690 ntBASIC15.27■□□□□ 0.04
RPS4XP62701 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RPS4XP62701 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RPS4XP62701 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
RPS4XP62701 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RPS4XP62701 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.27■□□□□ 0.03
RPS4XP62701 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RPS4XP62701 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
RPS4XP62701 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPS4XP62701 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPS4XP62701 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.26■□□□□ 0.03
RPS4XP62701 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RPS4XP62701 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPS4XP62701 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPS4XP62701 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPS4XP62701 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms