Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CLDN6P56747 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN6P56747 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.2■□□□□ 0.18
CLDN6P56747 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CLDN6P56747 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.2■□□□□ 0.18
CLDN6P56747 RN7SL692P-201ENST00000464677 288 ntBASIC16.2■□□□□ 0.18
CLDN6P56747 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN6P56747 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.2■□□□□ 0.18
CLDN6P56747 AL596325.1-201ENST00000563991 1082 ntBASIC16.2■□□□□ 0.18
CLDN6P56747 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.2■□□□□ 0.18
CLDN6P56747 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.2■□□□□ 0.18
CLDN6P56747 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CLDN6P56747 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN6P56747 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN6P56747 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CLDN6P56747 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CLDN6P56747 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN6P56747 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.2■□□□□ 0.18
CLDN6P56747 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.2■□□□□ 0.18
CLDN6P56747 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.2■□□□□ 0.18
CLDN6P56747 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.2■□□□□ 0.18
CLDN6P56747 LTB4R2-202ENST00000528054 3092 ntBASIC16.2■□□□□ 0.18
CLDN6P56747 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN6P56747 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.19■□□□□ 0.18
CLDN6P56747 LYSMD4-203ENST00000378904 2122 ntBASIC16.19■□□□□ 0.18
CLDN6P56747 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.19■□□□□ 0.18
CLDN6P56747 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN6P56747 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CLDN6P56747 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN6P56747 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
CLDN6P56747 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.19■□□□□ 0.18
CLDN6P56747 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN6P56747 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CLDN6P56747 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN6P56747 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.19■□□□□ 0.18
CLDN6P56747 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.19■□□□□ 0.18
CLDN6P56747 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN6P56747 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN6P56747 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN6P56747 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN6P56747 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN6P56747 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN6P56747 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.19■□□□□ 0.18
CLDN6P56747 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.19■□□□□ 0.18
CLDN6P56747 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.19■□□□□ 0.18
CLDN6P56747 AC027369.6-201ENST00000525520 931 ntBASIC16.19■□□□□ 0.18
CLDN6P56747 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN6P56747 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.19■□□□□ 0.18
CLDN6P56747 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.19■□□□□ 0.18
CLDN6P56747 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.19■□□□□ 0.18
CLDN6P56747 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
CLDN6P56747 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN6P56747 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.19■□□□□ 0.18
CLDN6P56747 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.19■□□□□ 0.18
CLDN6P56747 FLJ13224-201ENST00000313737 1514 ntBASIC16.19■□□□□ 0.18
CLDN6P56747 WASH6P-202ENST00000359512 1437 ntBASIC16.19■□□□□ 0.18
CLDN6P56747 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.19■□□□□ 0.18
CLDN6P56747 AC068880.1-201ENST00000507289 2297 ntBASIC16.19■□□□□ 0.18
CLDN6P56747 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN6P56747 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN6P56747 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN6P56747 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN6P56747 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN6P56747 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN6P56747 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN6P56747 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN6P56747 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.18■□□□□ 0.18
CLDN6P56747 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN6P56747 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN6P56747 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN6P56747 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CLDN6P56747 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.18■□□□□ 0.18
CLDN6P56747 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN6P56747 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN6P56747 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.18■□□□□ 0.18
CLDN6P56747 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.18■□□□□ 0.18
CLDN6P56747 AC241585.1-201ENST00000433527 519 ntBASIC16.18■□□□□ 0.18
CLDN6P56747 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.18■□□□□ 0.18
CLDN6P56747 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.18■□□□□ 0.18
CLDN6P56747 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN6P56747 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CLDN6P56747 AC005412.3-201ENST00000580309 715 ntBASIC16.18■□□□□ 0.18
CLDN6P56747 AC084121.4-201ENST00000641598 221 ntBASIC16.18■□□□□ 0.18
CLDN6P56747 AF228730.8-201ENST00000642140 221 ntBASIC16.18■□□□□ 0.18
CLDN6P56747 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.18■□□□□ 0.18
CLDN6P56747 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
CLDN6P56747 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN6P56747 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN6P56747 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN6P56747 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN6P56747 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.18■□□□□ 0.18
CLDN6P56747 AC100757.3-201ENST00000622361 1406 ntBASIC16.18■□□□□ 0.18
CLDN6P56747 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN6P56747 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN6P56747 AC016027.1-202ENST00000607927 1699 ntBASIC16.18■□□□□ 0.18
CLDN6P56747 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.17■□□□□ 0.18
CLDN6P56747 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN6P56747 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN6P56747 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN6P56747 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms