Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDE6CP51160 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDE6CP51160 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
PDE6CP51160 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDE6CP51160 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.31■□□□□ 0.52
PDE6CP51160 NCF1C-201ENST00000438382 1427 ntBASIC18.31■□□□□ 0.52
PDE6CP51160 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDE6CP51160 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDE6CP51160 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDE6CP51160 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PDE6CP51160 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.3■□□□□ 0.52
PDE6CP51160 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDE6CP51160 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDE6CP51160 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PDE6CP51160 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PDE6CP51160 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.3■□□□□ 0.52
PDE6CP51160 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
PDE6CP51160 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDE6CP51160 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDE6CP51160 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDE6CP51160 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDE6CP51160 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PDE6CP51160 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDE6CP51160 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PDE6CP51160 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDE6CP51160 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDE6CP51160 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.3■□□□□ 0.52
PDE6CP51160 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PDE6CP51160 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.3■□□□□ 0.52
PDE6CP51160 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.3■□□□□ 0.52
PDE6CP51160 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDE6CP51160 TERC-201ENST00000602385 541 ntBASIC18.3■□□□□ 0.52
PDE6CP51160 Z83851.2-201ENST00000609564 659 ntBASIC18.3■□□□□ 0.52
PDE6CP51160 AC005593.1-201ENST00000624894 515 ntBASIC18.3■□□□□ 0.52
PDE6CP51160 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.3■□□□□ 0.52
PDE6CP51160 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PDE6CP51160 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDE6CP51160 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PDE6CP51160 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PDE6CP51160 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.3■□□□□ 0.52
PDE6CP51160 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6CP51160 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6CP51160 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PDE6CP51160 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6CP51160 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.29■□□□□ 0.52
PDE6CP51160 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.29■□□□□ 0.52
PDE6CP51160 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.29■□□□□ 0.52
PDE6CP51160 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PDE6CP51160 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6CP51160 PMS2P7-201ENST00000506558 1336 ntBASIC18.29■□□□□ 0.52
PDE6CP51160 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PDE6CP51160 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.29■□□□□ 0.52
PDE6CP51160 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PDE6CP51160 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6CP51160 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6CP51160 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6CP51160 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6CP51160 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.29■□□□□ 0.52
PDE6CP51160 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.29■□□□□ 0.52
PDE6CP51160 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.29■□□□□ 0.52
PDE6CP51160 AC012640.2-201ENST00000561606 901 ntBASIC18.29■□□□□ 0.52
PDE6CP51160 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6CP51160 AC027601.4-201ENST00000611259 610 ntBASIC18.29■□□□□ 0.52
PDE6CP51160 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
PDE6CP51160 AC104109.2-201ENST00000602919 1418 ntBASIC18.29■□□□□ 0.52
PDE6CP51160 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6CP51160 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6CP51160 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PDE6CP51160 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6CP51160 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6CP51160 AGGF1P2-201ENST00000426656 2106 ntBASIC18.29■□□□□ 0.52
PDE6CP51160 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6CP51160 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6CP51160 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6CP51160 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.29■□□□□ 0.52
PDE6CP51160 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.29■□□□□ 0.52
PDE6CP51160 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE6CP51160 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
PDE6CP51160 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6CP51160 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.28■□□□□ 0.52
PDE6CP51160 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6CP51160 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.28■□□□□ 0.52
PDE6CP51160 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6CP51160 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6CP51160 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6CP51160 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6CP51160 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6CP51160 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6CP51160 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6CP51160 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6CP51160 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6CP51160 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.28■□□□□ 0.52
PDE6CP51160 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.28■□□□□ 0.52
PDE6CP51160 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
PDE6CP51160 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6CP51160 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6CP51160 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PDE6CP51160 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6CP51160 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6CP51160 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms