Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.86■□□□□ 0.45
PCK1P35558 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCK1P35558 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.86■□□□□ 0.45
PCK1P35558 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCK1P35558 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
PCK1P35558 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCK1P35558 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.86■□□□□ 0.45
PCK1P35558 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.86■□□□□ 0.45
PCK1P35558 SCARNA2-201ENST00000458748 420 ntBASIC17.86■□□□□ 0.45
PCK1P35558 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.86■□□□□ 0.45
PCK1P35558 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.86■□□□□ 0.45
PCK1P35558 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.86■□□□□ 0.45
PCK1P35558 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
PCK1P35558 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCK1P35558 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCK1P35558 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.86■□□□□ 0.45
PCK1P35558 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
PCK1P35558 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PCK1P35558 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCK1P35558 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCK1P35558 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCK1P35558 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCK1P35558 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCK1P35558 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.86■□□□□ 0.45
PCK1P35558 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCK1P35558 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.86■□□□□ 0.45
PCK1P35558 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCK1P35558 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.86■□□□□ 0.45
PCK1P35558 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
PCK1P35558 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.85■□□□□ 0.45
PCK1P35558 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PCK1P35558 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCK1P35558 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCK1P35558 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
PCK1P35558 TUBB8P12-201ENST00000308911 1335 ntBASIC17.85■□□□□ 0.45
PCK1P35558 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.85■□□□□ 0.45
PCK1P35558 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
PCK1P35558 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCK1P35558 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.85■□□□□ 0.45
PCK1P35558 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
PCK1P35558 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
PCK1P35558 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
PCK1P35558 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCK1P35558 TUBB7P-202ENST00000428444 1305 ntBASIC17.85■□□□□ 0.45
PCK1P35558 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.85■□□□□ 0.45
PCK1P35558 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCK1P35558 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.85■□□□□ 0.45
PCK1P35558 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.85■□□□□ 0.45
PCK1P35558 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.85■□□□□ 0.45
PCK1P35558 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
PCK1P35558 DUX4L17-201ENST00000557360 1267 ntBASIC17.85■□□□□ 0.45
PCK1P35558 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.85■□□□□ 0.45
PCK1P35558 TUBB8P7-204ENST00000567960 1332 ntBASIC17.85■□□□□ 0.45
PCK1P35558 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PCK1P35558 AL139424.1-201ENST00000607572 797 ntBASIC17.85■□□□□ 0.45
PCK1P35558 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCK1P35558 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
PCK1P35558 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.85■□□□□ 0.45
PCK1P35558 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCK1P35558 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCK1P35558 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCK1P35558 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
PCK1P35558 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCK1P35558 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PCK1P35558 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCK1P35558 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCK1P35558 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCK1P35558 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCK1P35558 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCK1P35558 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.84■□□□□ 0.45
PCK1P35558 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.84■□□□□ 0.45
PCK1P35558 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCK1P35558 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCK1P35558 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCK1P35558 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.84■□□□□ 0.45
PCK1P35558 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
PCK1P35558 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PCK1P35558 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCK1P35558 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.84■□□□□ 0.45
PCK1P35558 KRT18P56-201ENST00000507275 550 ntBASIC17.84■□□□□ 0.45
PCK1P35558 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCK1P35558 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
PCK1P35558 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.84■□□□□ 0.45
PCK1P35558 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCK1P35558 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PCK1P35558 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCK1P35558 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCK1P35558 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCK1P35558 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCK1P35558 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCK1P35558 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.84■□□□□ 0.45
PCK1P35558 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.84■□□□□ 0.45
PCK1P35558 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCK1P35558 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCK1P35558 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
PCK1P35558 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.83■□□□□ 0.45
PCK1P35558 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
PCK1P35558 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
PCK1P35558 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCK1P35558 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms