Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.87■□□□□ 0.13
CHMP24386 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.87■□□□□ 0.13
CHMP24386 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHMP24386 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CHMP24386 MYCLP1-201ENST00000372451 1075 ntBASIC15.87■□□□□ 0.13
CHMP24386 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHMP24386 AF186996.4-201ENST00000467186 377 ntBASIC15.87■□□□□ 0.13
CHMP24386 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.87■□□□□ 0.13
CHMP24386 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.87■□□□□ 0.13
CHMP24386 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHMP24386 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.87■□□□□ 0.13
CHMP24386 AC019129.2-201ENST00000609837 1235 ntBASIC15.87■□□□□ 0.13
CHMP24386 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CHMP24386 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CHMP24386 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.87■□□□□ 0.13
CHMP24386 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHMP24386 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.87■□□□□ 0.13
CHMP24386 AC079328.2-201ENST00000561241 3354 ntBASIC15.87■□□□□ 0.13
CHMP24386 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHMP24386 AC026691.1-201ENST00000602502 2017 ntBASIC15.87■□□□□ 0.13
CHMP24386 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CHMP24386 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.87■□□□□ 0.13
CHMP24386 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CHMP24386 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CHMP24386 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CHMP24386 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHMP24386 AC079776.2-201ENST00000641154 1609 ntBASIC15.86■□□□□ 0.13
CHMP24386 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CHMP24386 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHMP24386 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CHMP24386 SIGLEC16-201ENST00000599858 1437 ntBASIC15.86■□□□□ 0.13
CHMP24386 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CHMP24386 AC008741.2-201ENST00000612792 3115 ntBASIC15.86■□□□□ 0.13
CHMP24386 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHMP24386 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CHMP24386 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CHMP24386 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHMP24386 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CHMP24386 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.86■□□□□ 0.13
CHMP24386 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CHMP24386 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHMP24386 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHMP24386 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CHMP24386 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CHMP24386 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.86■□□□□ 0.13
CHMP24386 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHMP24386 KRT18P67-201ENST00000432816 1264 ntBASIC15.86■□□□□ 0.13
CHMP24386 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CHMP24386 AC009078.2-202ENST00000463353 338 ntBASIC15.86■□□□□ 0.13
CHMP24386 AC073648.2-201ENST00000510116 352 ntBASIC15.86■□□□□ 0.13
CHMP24386 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.86■□□□□ 0.13
CHMP24386 SLC25A6P4-201ENST00000586535 553 ntBASIC15.86■□□□□ 0.13
CHMP24386 AC073592.4-201ENST00000623827 446 ntBASIC15.86■□□□□ 0.13
CHMP24386 TP73-AS1-207ENST00000624167 988 ntBASIC15.86■□□□□ 0.13
CHMP24386 AC073592.5-201ENST00000624854 528 ntBASIC15.86■□□□□ 0.13
CHMP24386 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.86■□□□□ 0.13
CHMP24386 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHMP24386 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHMP24386 AC006449.5-201ENST00000610658 2098 ntBASIC15.86■□□□□ 0.13
CHMP24386 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CHMP24386 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHMP24386 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHMP24386 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.86■□□□□ 0.13
CHMP24386 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CHMP24386 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHMP24386 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CHMP24386 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.86■□□□□ 0.13
CHMP24386 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CHMP24386 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CHMP24386 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.85■□□□□ 0.13
CHMP24386 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CHMP24386 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CHMP24386 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.85■□□□□ 0.13
CHMP24386 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CHMP24386 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.85■□□□□ 0.13
CHMP24386 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.85■□□□□ 0.13
CHMP24386 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CHMP24386 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CHMP24386 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CHMP24386 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CHMP24386 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CHMP24386 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CHMP24386 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CHMP24386 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
CHMP24386 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CHMP24386 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CHMP24386 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.85■□□□□ 0.13
CHMP24386 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.85■□□□□ 0.13
CHMP24386 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.85■□□□□ 0.13
CHMP24386 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.85■□□□□ 0.13
CHMP24386 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CHMP24386 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.85■□□□□ 0.13
CHMP24386 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.85■□□□□ 0.13
CHMP24386 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.85■□□□□ 0.13
CHMP24386 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.85■□□□□ 0.13
CHMP24386 AC109462.3-201ENST00000573934 613 ntBASIC15.85■□□□□ 0.13
CHMP24386 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.85■□□□□ 0.13
CHMP24386 AL773604.1-201ENST00000617417 272 ntBASIC15.85■□□□□ 0.13
CHMP24386 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.85■□□□□ 0.13
CHMP24386 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms