Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC106730.1-201ENST00000566722 1090 ntBASIC14.5□□□□□ -0.09
TNFSF4P23510 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
TNFSF4P23510 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.5□□□□□ -0.09
TNFSF4P23510 AC027601.4-201ENST00000611259 610 ntBASIC14.5□□□□□ -0.09
TNFSF4P23510 AC004790.2-201ENST00000623588 572 ntBASIC14.5□□□□□ -0.09
TNFSF4P23510 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.5□□□□□ -0.09
TNFSF4P23510 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
TNFSF4P23510 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
TNFSF4P23510 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TNFSF4P23510 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TNFSF4P23510 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TNFSF4P23510 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TNFSF4P23510 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC14.5□□□□□ -0.09
TNFSF4P23510 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.5□□□□□ -0.09
TNFSF4P23510 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TNFSF4P23510 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TNFSF4P23510 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TNFSF4P23510 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC14.5□□□□□ -0.09
TNFSF4P23510 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TNFSF4P23510 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.5□□□□□ -0.09
TNFSF4P23510 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TNFSF4P23510 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TNFSF4P23510 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFSF4P23510 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFSF4P23510 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFSF4P23510 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TNFSF4P23510 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.49□□□□□ -0.09
TNFSF4P23510 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFSF4P23510 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFSF4P23510 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFSF4P23510 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TNFSF4P23510 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TNFSF4P23510 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TNFSF4P23510 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
TNFSF4P23510 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFSF4P23510 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.49□□□□□ -0.09
TNFSF4P23510 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFSF4P23510 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFSF4P23510 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFSF4P23510 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.49□□□□□ -0.09
TNFSF4P23510 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TNFSF4P23510 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
TNFSF4P23510 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.49□□□□□ -0.09
TNFSF4P23510 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.49□□□□□ -0.09
TNFSF4P23510 AC087163.2-201ENST00000457299 853 ntBASIC14.49□□□□□ -0.09
TNFSF4P23510 RNA5SP416-201ENST00000516838 111 ntBASIC14.49□□□□□ -0.09
TNFSF4P23510 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.49□□□□□ -0.09
TNFSF4P23510 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
TNFSF4P23510 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFSF4P23510 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.49□□□□□ -0.09
TNFSF4P23510 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
TNFSF4P23510 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TNFSF4P23510 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.49□□□□□ -0.09
TNFSF4P23510 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFSF4P23510 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFSF4P23510 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TNFSF4P23510 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.49□□□□□ -0.09
TNFSF4P23510 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.49□□□□□ -0.09
TNFSF4P23510 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFSF4P23510 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TNFSF4P23510 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.49□□□□□ -0.09
TNFSF4P23510 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFSF4P23510 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TNFSF4P23510 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TNFSF4P23510 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.48□□□□□ -0.09
TNFSF4P23510 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TNFSF4P23510 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TNFSF4P23510 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TNFSF4P23510 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TNFSF4P23510 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TNFSF4P23510 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.48□□□□□ -0.09
TNFSF4P23510 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TNFSF4P23510 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TNFSF4P23510 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.48□□□□□ -0.09
TNFSF4P23510 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
TNFSF4P23510 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TNFSF4P23510 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TNFSF4P23510 MED15P5-201ENST00000423150 992 ntBASIC14.48□□□□□ -0.09
TNFSF4P23510 PMS2P1-201ENST00000431037 1228 ntBASIC14.48□□□□□ -0.09
TNFSF4P23510 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.48□□□□□ -0.09
TNFSF4P23510 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TNFSF4P23510 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.48□□□□□ -0.09
TNFSF4P23510 VN2R19P-201ENST00000442399 1052 ntBASIC14.48□□□□□ -0.09
TNFSF4P23510 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TNFSF4P23510 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.48□□□□□ -0.09
TNFSF4P23510 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.48□□□□□ -0.09
TNFSF4P23510 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.48□□□□□ -0.09
TNFSF4P23510 KRT18P58-201ENST00000527480 1120 ntBASIC14.48□□□□□ -0.09
TNFSF4P23510 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.48□□□□□ -0.09
TNFSF4P23510 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.48□□□□□ -0.09
TNFSF4P23510 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.48□□□□□ -0.09
TNFSF4P23510 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.48□□□□□ -0.09
TNFSF4P23510 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.48□□□□□ -0.09
TNFSF4P23510 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
TNFSF4P23510 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.48□□□□□ -0.09
TNFSF4P23510 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TNFSF4P23510 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.48□□□□□ -0.09
TNFSF4P23510 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TNFSF4P23510 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TNFSF4P23510 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms