Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MMP8P22894 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MMP8P22894 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
MMP8P22894 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MMP8P22894 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
MMP8P22894 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MMP8P22894 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.76■□□□□ 0.43
MMP8P22894 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MMP8P22894 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MMP8P22894 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
MMP8P22894 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
MMP8P22894 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MMP8P22894 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MMP8P22894 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MMP8P22894 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.76■□□□□ 0.43
MMP8P22894 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MMP8P22894 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.76■□□□□ 0.43
MMP8P22894 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MMP8P22894 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.76■□□□□ 0.43
MMP8P22894 AC098831.1-202ENST00000438821 336 ntBASIC17.76■□□□□ 0.43
MMP8P22894 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
MMP8P22894 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
MMP8P22894 AL662844.1-201ENST00000546340 181 ntBASIC17.76■□□□□ 0.43
MMP8P22894 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.76■□□□□ 0.43
MMP8P22894 AP001005.1-201ENST00000571755 1248 ntBASIC17.76■□□□□ 0.43
MMP8P22894 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.76■□□□□ 0.43
MMP8P22894 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
MMP8P22894 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
MMP8P22894 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.76■□□□□ 0.43
MMP8P22894 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.76■□□□□ 0.43
MMP8P22894 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MMP8P22894 AL671710.1-201ENST00000610245 2349 ntBASIC17.76■□□□□ 0.43
MMP8P22894 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MMP8P22894 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MMP8P22894 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.76■□□□□ 0.43
MMP8P22894 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.76■□□□□ 0.43
MMP8P22894 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MMP8P22894 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MMP8P22894 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.75■□□□□ 0.43
MMP8P22894 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP8P22894 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MMP8P22894 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
MMP8P22894 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP8P22894 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP8P22894 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP8P22894 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP8P22894 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP8P22894 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP8P22894 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
MMP8P22894 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.75■□□□□ 0.43
MMP8P22894 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
MMP8P22894 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.75■□□□□ 0.43
MMP8P22894 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.75■□□□□ 0.43
MMP8P22894 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
MMP8P22894 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.75■□□□□ 0.43
MMP8P22894 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
MMP8P22894 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.75■□□□□ 0.43
MMP8P22894 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP8P22894 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MMP8P22894 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MMP8P22894 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.75■□□□□ 0.43
MMP8P22894 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP8P22894 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
MMP8P22894 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP8P22894 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP8P22894 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.75■□□□□ 0.43
MMP8P22894 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP8P22894 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MMP8P22894 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
MMP8P22894 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MMP8P22894 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MMP8P22894 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.75■□□□□ 0.43
MMP8P22894 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.75■□□□□ 0.43
MMP8P22894 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.75■□□□□ 0.43
MMP8P22894 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
MMP8P22894 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MMP8P22894 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.74■□□□□ 0.43
MMP8P22894 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MMP8P22894 HLA-A-201ENST00000376802 1334 ntBASIC17.74■□□□□ 0.43
MMP8P22894 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.74■□□□□ 0.43
MMP8P22894 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.74■□□□□ 0.43
MMP8P22894 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
MMP8P22894 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MMP8P22894 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MMP8P22894 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
MMP8P22894 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.74■□□□□ 0.43
MMP8P22894 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MMP8P22894 PRSS29P-201ENST00000440800 595 ntBASIC17.74■□□□□ 0.43
MMP8P22894 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MMP8P22894 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
MMP8P22894 IGHV3-22-201ENST00000520721 359 ntBASIC17.74■□□□□ 0.43
MMP8P22894 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.74■□□□□ 0.43
MMP8P22894 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.74■□□□□ 0.43
MMP8P22894 AC010654.1-201ENST00000615722 808 ntBASIC17.74■□□□□ 0.43
MMP8P22894 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MMP8P22894 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MMP8P22894 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MMP8P22894 AL512652.2-201ENST00000625156 1716 ntBASIC17.74■□□□□ 0.43
MMP8P22894 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.74■□□□□ 0.43
MMP8P22894 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms