Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 AC116165.1-201ENST00000611806 668 ntBASIC18.22■□□□□ 0.51
SYN1P17600 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.22■□□□□ 0.51
SYN1P17600 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.22■□□□□ 0.51
SYN1P17600 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.22■□□□□ 0.51
SYN1P17600 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.22■□□□□ 0.51
SYN1P17600 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SYN1P17600 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SYN1P17600 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SYN1P17600 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SYN1P17600 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.22■□□□□ 0.51
SYN1P17600 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SYN1P17600 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
SYN1P17600 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
SYN1P17600 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SYN1P17600 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.21■□□□□ 0.51
SYN1P17600 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SYN1P17600 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SYN1P17600 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SYN1P17600 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
SYN1P17600 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.21■□□□□ 0.51
SYN1P17600 AC131009.4-201ENST00000624048 1740 ntBASIC18.21■□□□□ 0.51
SYN1P17600 TOP3BP1-201ENST00000420768 1380 ntBASIC18.21■□□□□ 0.51
SYN1P17600 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SYN1P17600 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SYN1P17600 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SYN1P17600 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SYN1P17600 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
SYN1P17600 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SYN1P17600 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SYN1P17600 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
SYN1P17600 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC18.21■□□□□ 0.51
SYN1P17600 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SYN1P17600 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC18.21■□□□□ 0.51
SYN1P17600 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.21■□□□□ 0.51
SYN1P17600 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC18.21■□□□□ 0.51
SYN1P17600 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC18.21■□□□□ 0.51
SYN1P17600 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC18.21■□□□□ 0.51
SYN1P17600 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.21■□□□□ 0.51
SYN1P17600 SRD5A3P1-201ENST00000603021 949 ntBASIC18.21■□□□□ 0.51
SYN1P17600 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SYN1P17600 WFDC1-204ENST00000613603 549 ntBASIC18.21■□□□□ 0.51
SYN1P17600 RPS24-214ENST00000613865 538 ntTSL 5 BASIC18.21■□□□□ 0.51
SYN1P17600 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SYN1P17600 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC18.21■□□□□ 0.51
SYN1P17600 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.21■□□□□ 0.51
SYN1P17600 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18.21■□□□□ 0.51
SYN1P17600 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SYN1P17600 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SYN1P17600 KRT18P55-202ENST00000578578 1546 ntBASIC18.21■□□□□ 0.51
SYN1P17600 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SYN1P17600 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SYN1P17600 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.21■□□□□ 0.51
SYN1P17600 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SYN1P17600 AC087289.5-201ENST00000586076 3175 ntBASIC18.21■□□□□ 0.51
SYN1P17600 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SYN1P17600 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
SYN1P17600 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
SYN1P17600 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
SYN1P17600 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.2■□□□□ 0.5
SYN1P17600 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
SYN1P17600 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.2■□□□□ 0.5
SYN1P17600 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.2■□□□□ 0.5
SYN1P17600 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SYN1P17600 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SYN1P17600 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.2■□□□□ 0.5
SYN1P17600 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
SYN1P17600 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SYN1P17600 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.2■□□□□ 0.5
SYN1P17600 FAM220BP-201ENST00000377689 816 ntBASIC18.2■□□□□ 0.5
SYN1P17600 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
SYN1P17600 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.2■□□□□ 0.5
SYN1P17600 AC092506.1-202ENST00000401022 528 ntBASIC18.2■□□□□ 0.5
SYN1P17600 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SYN1P17600 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.2■□□□□ 0.5
SYN1P17600 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
SYN1P17600 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SYN1P17600 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC18.2■□□□□ 0.5
SYN1P17600 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SYN1P17600 RNA5SP410-201ENST00000516285 106 ntBASIC18.2■□□□□ 0.5
SYN1P17600 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SYN1P17600 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC18.2■□□□□ 0.5
SYN1P17600 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.2■□□□□ 0.5
SYN1P17600 AC021097.1-201ENST00000607902 574 ntBASIC18.2■□□□□ 0.5
SYN1P17600 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SYN1P17600 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.2■□□□□ 0.5
SYN1P17600 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SYN1P17600 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SYN1P17600 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SYN1P17600 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SYN1P17600 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SYN1P17600 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
SYN1P17600 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SYN1P17600 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.19■□□□□ 0.5
SYN1P17600 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SYN1P17600 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SYN1P17600 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.19■□□□□ 0.5
SYN1P17600 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SYN1P17600 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.19■□□□□ 0.5
SYN1P17600 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
SYN1P17600 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms