Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 KRT16P4-201ENST00000453883 522 ntBASIC17.46■□□□□ 0.39
BRAFP15056 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.46■□□□□ 0.39
BRAFP15056 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.46■□□□□ 0.39
BRAFP15056 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BRAFP15056 AC114341.1-201ENST00000618070 349 ntBASIC17.46■□□□□ 0.39
BRAFP15056 AL691432.3-201ENST00000621860 400 ntBASIC17.46■□□□□ 0.39
BRAFP15056 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
BRAFP15056 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BRAFP15056 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.46■□□□□ 0.39
BRAFP15056 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
BRAFP15056 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
BRAFP15056 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BRAFP15056 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.46■□□□□ 0.39
BRAFP15056 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
BRAFP15056 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.46■□□□□ 0.39
BRAFP15056 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
BRAFP15056 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
BRAFP15056 LINC00554-201ENST00000564841 3011 ntBASIC17.45■□□□□ 0.38
BRAFP15056 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.45■□□□□ 0.38
BRAFP15056 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.45■□□□□ 0.38
BRAFP15056 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
BRAFP15056 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BRAFP15056 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.45■□□□□ 0.38
BRAFP15056 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
BRAFP15056 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BRAFP15056 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BRAFP15056 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BRAFP15056 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BRAFP15056 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
BRAFP15056 RCN1P2-201ENST00000398357 915 ntBASIC17.45■□□□□ 0.38
BRAFP15056 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.45■□□□□ 0.38
BRAFP15056 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.45■□□□□ 0.38
BRAFP15056 AC124947.2-201ENST00000547118 1133 ntBASIC17.45■□□□□ 0.38
BRAFP15056 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BRAFP15056 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
BRAFP15056 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.45■□□□□ 0.38
BRAFP15056 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.45■□□□□ 0.38
BRAFP15056 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BRAFP15056 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
BRAFP15056 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
BRAFP15056 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
BRAFP15056 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BRAFP15056 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
BRAFP15056 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
BRAFP15056 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BRAFP15056 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
BRAFP15056 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BRAFP15056 AC022188.1-201ENST00000620960 1664 ntBASIC17.45■□□□□ 0.38
BRAFP15056 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.45■□□□□ 0.38
BRAFP15056 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.45■□□□□ 0.38
BRAFP15056 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
BRAFP15056 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BRAFP15056 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.44■□□□□ 0.38
BRAFP15056 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
BRAFP15056 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.44■□□□□ 0.38
BRAFP15056 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
BRAFP15056 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BRAFP15056 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.44■□□□□ 0.38
BRAFP15056 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
BRAFP15056 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
BRAFP15056 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
BRAFP15056 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.44■□□□□ 0.38
BRAFP15056 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.44■□□□□ 0.38
BRAFP15056 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BRAFP15056 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.44■□□□□ 0.38
BRAFP15056 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
BRAFP15056 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BRAFP15056 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
BRAFP15056 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BRAFP15056 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
BRAFP15056 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.44■□□□□ 0.38
BRAFP15056 EMBP1-201ENST00000458200 901 ntBASIC17.44■□□□□ 0.38
BRAFP15056 AC002558.1-201ENST00000488906 803 ntBASIC17.44■□□□□ 0.38
BRAFP15056 AC009533.2-201ENST00000543664 586 ntBASIC17.44■□□□□ 0.38
BRAFP15056 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.44■□□□□ 0.38
BRAFP15056 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.44■□□□□ 0.38
BRAFP15056 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.44■□□□□ 0.38
BRAFP15056 MIR5100-201ENST00000579544 119 ntBASIC17.44■□□□□ 0.38
BRAFP15056 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.44■□□□□ 0.38
BRAFP15056 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.44■□□□□ 0.38
BRAFP15056 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.44■□□□□ 0.38
BRAFP15056 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.44■□□□□ 0.38
BRAFP15056 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.44■□□□□ 0.38
BRAFP15056 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
BRAFP15056 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
BRAFP15056 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
BRAFP15056 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
BRAFP15056 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BRAFP15056 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
BRAFP15056 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
BRAFP15056 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.44■□□□□ 0.38
BRAFP15056 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.44■□□□□ 0.38
BRAFP15056 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
BRAFP15056 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.44■□□□□ 0.38
BRAFP15056 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.44■□□□□ 0.38
BRAFP15056 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.44■□□□□ 0.38
BRAFP15056 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.44■□□□□ 0.38
BRAFP15056 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
BRAFP15056 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BRAFP15056 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms