Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.43■□□□□ 0.7
SCG2P13521 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.43■□□□□ 0.7
SCG2P13521 AC009053.2-201ENST00000563701 2365 ntBASIC19.43■□□□□ 0.7
SCG2P13521 AL603756.1-201ENST00000606511 2163 ntBASIC19.43■□□□□ 0.7
SCG2P13521 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.43■□□□□ 0.7
SCG2P13521 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCG2P13521 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCG2P13521 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCG2P13521 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SCG2P13521 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.43■□□□□ 0.7
SCG2P13521 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.43■□□□□ 0.7
SCG2P13521 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCG2P13521 MIR1233-2-201ENST00000408138 82 ntBASIC19.43■□□□□ 0.7
SCG2P13521 MIR1233-1-201ENST00000408722 82 ntBASIC19.43■□□□□ 0.7
SCG2P13521 HCG4-201ENST00000418983 998 ntBASIC19.43■□□□□ 0.7
SCG2P13521 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.43■□□□□ 0.7
SCG2P13521 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.43■□□□□ 0.7
SCG2P13521 AC087641.1-201ENST00000557561 1021 ntBASIC19.43■□□□□ 0.7
SCG2P13521 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.43■□□□□ 0.7
SCG2P13521 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.43■□□□□ 0.7
SCG2P13521 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SCG2P13521 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCG2P13521 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCG2P13521 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
SCG2P13521 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SCG2P13521 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCG2P13521 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.43■□□□□ 0.7
SCG2P13521 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SCG2P13521 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.43■□□□□ 0.7
SCG2P13521 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.43■□□□□ 0.7
SCG2P13521 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SCG2P13521 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCG2P13521 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCG2P13521 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SCG2P13521 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SCG2P13521 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCG2P13521 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SCG2P13521 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCG2P13521 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCG2P13521 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SCG2P13521 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.42■□□□□ 0.7
SCG2P13521 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCG2P13521 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCG2P13521 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCG2P13521 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.42■□□□□ 0.7
SCG2P13521 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.42■□□□□ 0.7
SCG2P13521 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SCG2P13521 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCG2P13521 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SCG2P13521 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
SCG2P13521 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.42■□□□□ 0.7
SCG2P13521 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.42■□□□□ 0.7
SCG2P13521 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
SCG2P13521 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.42■□□□□ 0.7
SCG2P13521 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.42■□□□□ 0.7
SCG2P13521 MIR4515-201ENST00000584082 81 ntBASIC19.42■□□□□ 0.7
SCG2P13521 CYP2A7P1-201ENST00000595391 815 ntBASIC19.42■□□□□ 0.7
SCG2P13521 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.42■□□□□ 0.7
SCG2P13521 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.42■□□□□ 0.7
SCG2P13521 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCG2P13521 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCG2P13521 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCG2P13521 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SCG2P13521 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SCG2P13521 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
SCG2P13521 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SCG2P13521 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SCG2P13521 AC012569.1-201ENST00000591191 1524 ntBASIC19.41■□□□□ 0.7
SCG2P13521 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SCG2P13521 AC011676.5-201ENST00000624864 2660 ntBASIC19.41■□□□□ 0.7
SCG2P13521 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.41■□□□□ 0.7
SCG2P13521 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCG2P13521 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCG2P13521 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SCG2P13521 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SCG2P13521 FLJ38576-201ENST00000623820 2459 ntBASIC19.41■□□□□ 0.7
SCG2P13521 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.41■□□□□ 0.7
SCG2P13521 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCG2P13521 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.41■□□□□ 0.7
SCG2P13521 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCG2P13521 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.41■□□□□ 0.7
SCG2P13521 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
SCG2P13521 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.41■□□□□ 0.7
SCG2P13521 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.41■□□□□ 0.7
SCG2P13521 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.41■□□□□ 0.7
SCG2P13521 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.41■□□□□ 0.7
SCG2P13521 AC023141.13-201ENST00000604991 943 ntBASIC19.41■□□□□ 0.7
SCG2P13521 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.41■□□□□ 0.7
SCG2P13521 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.41■□□□□ 0.7
SCG2P13521 AC004877.2-201ENST00000623941 599 ntBASIC19.41■□□□□ 0.7
SCG2P13521 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SCG2P13521 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCG2P13521 SNX33P1-201ENST00000592116 1762 ntBASIC19.41■□□□□ 0.7
SCG2P13521 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCG2P13521 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SCG2P13521 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCG2P13521 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCG2P13521 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SCG2P13521 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SCG2P13521 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms