Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCNAP12004 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PCNAP12004 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCNAP12004 DOC2GP-204ENST00000639052 2548 ntBASIC16.55■□□□□ 0.24
PCNAP12004 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCNAP12004 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.55■□□□□ 0.24
PCNAP12004 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.55■□□□□ 0.24
PCNAP12004 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCNAP12004 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCNAP12004 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.54■□□□□ 0.24
PCNAP12004 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCNAP12004 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
PCNAP12004 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCNAP12004 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCNAP12004 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PCNAP12004 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.54■□□□□ 0.24
PCNAP12004 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PCNAP12004 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PCNAP12004 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCNAP12004 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.54■□□□□ 0.24
PCNAP12004 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PCNAP12004 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCNAP12004 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCNAP12004 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCNAP12004 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
PCNAP12004 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCNAP12004 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PCNAP12004 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PCNAP12004 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PCNAP12004 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCNAP12004 RBM17P3-201ENST00000417687 1192 ntBASIC16.54■□□□□ 0.24
PCNAP12004 LINC00982-205ENST00000420957 435 ntBASIC16.54■□□□□ 0.24
PCNAP12004 ACTG1P4-201ENST00000425123 1122 ntBASIC16.54■□□□□ 0.24
PCNAP12004 KRT18P56-201ENST00000507275 550 ntBASIC16.54■□□□□ 0.24
PCNAP12004 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCNAP12004 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.54■□□□□ 0.24
PCNAP12004 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.54■□□□□ 0.24
PCNAP12004 CLEC4GP1-201ENST00000596555 870 ntBASIC16.54■□□□□ 0.24
PCNAP12004 AC073592.4-201ENST00000623827 446 ntBASIC16.54■□□□□ 0.24
PCNAP12004 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCNAP12004 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCNAP12004 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCNAP12004 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCNAP12004 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.54■□□□□ 0.24
PCNAP12004 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCNAP12004 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCNAP12004 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCNAP12004 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PCNAP12004 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCNAP12004 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCNAP12004 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.53■□□□□ 0.24
PCNAP12004 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCNAP12004 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCNAP12004 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCNAP12004 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCNAP12004 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCNAP12004 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCNAP12004 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.53■□□□□ 0.24
PCNAP12004 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PCNAP12004 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCNAP12004 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCNAP12004 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCNAP12004 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PCNAP12004 LINC02199-201ENST00000506655 2702 ntBASIC16.53■□□□□ 0.24
PCNAP12004 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCNAP12004 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCNAP12004 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCNAP12004 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCNAP12004 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.53■□□□□ 0.24
PCNAP12004 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.53■□□□□ 0.24
PCNAP12004 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.53■□□□□ 0.24
PCNAP12004 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PCNAP12004 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCNAP12004 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.53■□□□□ 0.24
PCNAP12004 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCNAP12004 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.53■□□□□ 0.24
PCNAP12004 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.53■□□□□ 0.24
PCNAP12004 NKAPP1-205ENST00000585790 367 ntBASIC16.53■□□□□ 0.24
PCNAP12004 AC008608.2-201ENST00000606089 416 ntBASIC16.53■□□□□ 0.24
PCNAP12004 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCNAP12004 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCNAP12004 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCNAP12004 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCNAP12004 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.53■□□□□ 0.24
PCNAP12004 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCNAP12004 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.53■□□□□ 0.24
PCNAP12004 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCNAP12004 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCNAP12004 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCNAP12004 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCNAP12004 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCNAP12004 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCNAP12004 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCNAP12004 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.53■□□□□ 0.24
PCNAP12004 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCNAP12004 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
PCNAP12004 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
PCNAP12004 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCNAP12004 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCNAP12004 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms