Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL5A2P05997 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL5A2P05997 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL5A2P05997 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC21.91■■□□□ 1.1
COL5A2P05997 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL5A2P05997 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC21.91■■□□□ 1.1
COL5A2P05997 PXK-206ENST00000463280 2825 ntTSL 2 BASIC21.91■■□□□ 1.1
COL5A2P05997 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL5A2P05997 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL5A2P05997 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC21.91■■□□□ 1.1
COL5A2P05997 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
COL5A2P05997 TPRX2P-201ENST00000535362 881 ntBASIC21.91■■□□□ 1.1
COL5A2P05997 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC21.91■■□□□ 1.1
COL5A2P05997 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC21.91■■□□□ 1.1
COL5A2P05997 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
COL5A2P05997 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL5A2P05997 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL5A2P05997 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL5A2P05997 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
COL5A2P05997 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.91■■□□□ 1.1
COL5A2P05997 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC21.91■■□□□ 1.1
COL5A2P05997 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC21.91■■□□□ 1.1
COL5A2P05997 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL5A2P05997 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC21.91■■□□□ 1.1
COL5A2P05997 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC21.91■■□□□ 1.1
COL5A2P05997 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
COL5A2P05997 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
COL5A2P05997 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL5A2P05997 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC21.9■■□□□ 1.1
COL5A2P05997 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL5A2P05997 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC21.9■■□□□ 1.1
COL5A2P05997 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC21.9■■□□□ 1.1
COL5A2P05997 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC21.9■■□□□ 1.1
COL5A2P05997 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC21.9■■□□□ 1.1
COL5A2P05997 AC061975.2-201ENST00000581722 295 ntBASIC21.9■■□□□ 1.1
COL5A2P05997 RPS15-212ENST00000593052 629 ntTSL 2 BASIC21.9■■□□□ 1.1
COL5A2P05997 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC21.9■■□□□ 1.1
COL5A2P05997 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL5A2P05997 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC21.9■■□□□ 1.1
COL5A2P05997 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC21.9■■□□□ 1.1
COL5A2P05997 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL5A2P05997 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL5A2P05997 AC004408.2-201ENST00000623613 2777 ntBASIC21.9■■□□□ 1.1
COL5A2P05997 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.9■■□□□ 1.1
COL5A2P05997 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
COL5A2P05997 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
COL5A2P05997 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
COL5A2P05997 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL5A2P05997 DPM2-202ENST00000373110 738 ntTSL 2 BASIC21.9■■□□□ 1.1
COL5A2P05997 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC21.9■■□□□ 1.1
COL5A2P05997 SPDYE17-201ENST00000412399 783 ntBASIC21.9■■□□□ 1.1
COL5A2P05997 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC21.9■■□□□ 1.1
COL5A2P05997 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC21.9■■□□□ 1.1
COL5A2P05997 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC21.9■■□□□ 1.1
COL5A2P05997 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC21.9■■□□□ 1.1
COL5A2P05997 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
COL5A2P05997 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC21.9■■□□□ 1.1
COL5A2P05997 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC21.9■■□□□ 1.1
COL5A2P05997 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC21.9■■□□□ 1.1
COL5A2P05997 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC21.9■■□□□ 1.1
COL5A2P05997 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC21.9■■□□□ 1.1
COL5A2P05997 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC21.9■■□□□ 1.1
COL5A2P05997 AL033527.5-202ENST00000641632 1098 ntBASIC21.9■■□□□ 1.1
COL5A2P05997 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
COL5A2P05997 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
COL5A2P05997 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.1
COL5A2P05997 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
COL5A2P05997 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC21.89■■□□□ 1.1
COL5A2P05997 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC21.89■■□□□ 1.09
COL5A2P05997 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL5A2P05997 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC21.89■■□□□ 1.09
COL5A2P05997 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
COL5A2P05997 AL138688.1-201ENST00000624851 1594 ntBASIC21.89■■□□□ 1.09
COL5A2P05997 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
COL5A2P05997 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
COL5A2P05997 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
COL5A2P05997 ANKRD19P-201ENST00000338192 862 ntBASIC21.89■■□□□ 1.09
COL5A2P05997 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC21.89■■□□□ 1.09
COL5A2P05997 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL5A2P05997 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
COL5A2P05997 MYCLP2-201ENST00000449268 967 ntBASIC21.89■■□□□ 1.09
COL5A2P05997 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC21.89■■□□□ 1.09
COL5A2P05997 AC124947.2-201ENST00000547118 1133 ntBASIC21.89■■□□□ 1.09
COL5A2P05997 AC123567.1-201ENST00000548294 1261 ntBASIC21.89■■□□□ 1.09
COL5A2P05997 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC21.89■■□□□ 1.09
COL5A2P05997 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC21.89■■□□□ 1.09
COL5A2P05997 MIR4525-201ENST00000580000 75 ntBASIC21.89■■□□□ 1.09
COL5A2P05997 AC008735.3-201ENST00000596646 500 ntBASIC21.89■■□□□ 1.09
COL5A2P05997 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
COL5A2P05997 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC21.88■■□□□ 1.09
COL5A2P05997 PC-204ENST00000524491 1714 ntTSL 2 BASIC21.88■■□□□ 1.09
COL5A2P05997 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
COL5A2P05997 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC21.88■■□□□ 1.09
COL5A2P05997 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL5A2P05997 AC006277.1-201ENST00000624348 1610 ntBASIC21.88■■□□□ 1.09
COL5A2P05997 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL5A2P05997 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL5A2P05997 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL5A2P05997 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
COL5A2P05997 MPV17-208ENST00000405076 603 ntTSL 5 BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms