Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
HLA-DQB2P05538 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DQB2P05538 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DQB2P05538 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DQB2P05538 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.15■□□□□ 0.34
HLA-DQB2P05538 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
HLA-DQB2P05538 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DQB2P05538 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.15■□□□□ 0.34
HLA-DQB2P05538 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DQB2P05538 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.15■□□□□ 0.34
HLA-DQB2P05538 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DQB2P05538 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DQB2P05538 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DQB2P05538 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DQB2P05538 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DQB2P05538 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HLA-DQB2P05538 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.15■□□□□ 0.34
HLA-DQB2P05538 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.15■□□□□ 0.34
HLA-DQB2P05538 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DQB2P05538 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.34
HLA-DQB2P05538 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
HLA-DQB2P05538 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.34
HLA-DQB2P05538 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.14■□□□□ 0.34
HLA-DQB2P05538 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DQB2P05538 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.14■□□□□ 0.33
HLA-DQB2P05538 HLA-A-202ENST00000376806 1854 ntBASIC17.14■□□□□ 0.33
HLA-DQB2P05538 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DQB2P05538 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DQB2P05538 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.14■□□□□ 0.33
HLA-DQB2P05538 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DQB2P05538 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DQB2P05538 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DQB2P05538 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
HLA-DQB2P05538 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DQB2P05538 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
HLA-DQB2P05538 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DQB2P05538 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
HLA-DQB2P05538 IGLL3P-201ENST00000412472 434 ntBASIC17.14■□□□□ 0.33
HLA-DQB2P05538 AL590627.1-203ENST00000421194 1026 ntBASIC17.14■□□□□ 0.33
HLA-DQB2P05538 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DQB2P05538 SLC25A1P1-201ENST00000528351 927 ntBASIC17.14■□□□□ 0.33
HLA-DQB2P05538 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DQB2P05538 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.14■□□□□ 0.33
HLA-DQB2P05538 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.14■□□□□ 0.33
HLA-DQB2P05538 AC034105.1-201ENST00000563488 319 ntBASIC17.14■□□□□ 0.33
HLA-DQB2P05538 AC145285.3-201ENST00000564603 959 ntBASIC17.14■□□□□ 0.33
HLA-DQB2P05538 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.14■□□□□ 0.33
HLA-DQB2P05538 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
HLA-DQB2P05538 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.14■□□□□ 0.33
HLA-DQB2P05538 ACTL9-202ENST00000612068 1252 ntBASIC17.14■□□□□ 0.33
HLA-DQB2P05538 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.14■□□□□ 0.33
HLA-DQB2P05538 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
HLA-DQB2P05538 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DQB2P05538 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.14■□□□□ 0.33
HLA-DQB2P05538 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.14■□□□□ 0.33
HLA-DQB2P05538 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DQB2P05538 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DQB2P05538 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DQB2P05538 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.13■□□□□ 0.33
HLA-DQB2P05538 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DQB2P05538 AC131009.4-201ENST00000624048 1740 ntBASIC17.13■□□□□ 0.33
HLA-DQB2P05538 AL353732.1-201ENST00000569618 1459 ntBASIC17.13■□□□□ 0.33
HLA-DQB2P05538 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DQB2P05538 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DQB2P05538 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
HLA-DQB2P05538 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DQB2P05538 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DQB2P05538 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DQB2P05538 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DQB2P05538 VN2R19P-201ENST00000442399 1052 ntBASIC17.13■□□□□ 0.33
HLA-DQB2P05538 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
HLA-DQB2P05538 AC120114.3-201ENST00000611923 658 ntBASIC17.13■□□□□ 0.33
HLA-DQB2P05538 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.13■□□□□ 0.33
HLA-DQB2P05538 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.13■□□□□ 0.33
HLA-DQB2P05538 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DQB2P05538 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HLA-DQB2P05538 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DQB2P05538 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.13■□□□□ 0.33
HLA-DQB2P05538 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
HLA-DQB2P05538 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.13■□□□□ 0.33
HLA-DQB2P05538 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DQB2P05538 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.13■□□□□ 0.33
HLA-DQB2P05538 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DQB2P05538 SNX33P1-201ENST00000592116 1762 ntBASIC17.12■□□□□ 0.33
HLA-DQB2P05538 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.12■□□□□ 0.33
HLA-DQB2P05538 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DQB2P05538 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DQB2P05538 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.12■□□□□ 0.33
HLA-DQB2P05538 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DQB2P05538 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DQB2P05538 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DQB2P05538 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DQB2P05538 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
HLA-DQB2P05538 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DQB2P05538 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DQB2P05538 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
HLA-DQB2P05538 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DQB2P05538 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
HLA-DQB2P05538 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.12■□□□□ 0.33
HLA-DQB2P05538 PCDHA14-201ENST00000506751 2298 ntBASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms