Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLPXO76031 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.43■□□□□ 0.06
CLPXO76031 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC15.43■□□□□ 0.06
CLPXO76031 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLPXO76031 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.43■□□□□ 0.06
CLPXO76031 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLPXO76031 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLPXO76031 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.43■□□□□ 0.06
CLPXO76031 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
CLPXO76031 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.43■□□□□ 0.06
CLPXO76031 AP002414.2-201ENST00000591780 3365 ntBASIC15.43■□□□□ 0.06
CLPXO76031 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.43■□□□□ 0.06
CLPXO76031 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLPXO76031 TSPY14P-201ENST00000303979 915 ntBASIC15.43■□□□□ 0.06
CLPXO76031 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC15.43■□□□□ 0.06
CLPXO76031 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.43■□□□□ 0.06
CLPXO76031 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.43■□□□□ 0.06
CLPXO76031 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.43■□□□□ 0.06
CLPXO76031 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.43■□□□□ 0.06
CLPXO76031 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLPXO76031 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CLPXO76031 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLPXO76031 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLPXO76031 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLPXO76031 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLPXO76031 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLPXO76031 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLPXO76031 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.43■□□□□ 0.06
CLPXO76031 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.43■□□□□ 0.06
CLPXO76031 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CLPXO76031 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.43■□□□□ 0.06
CLPXO76031 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLPXO76031 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLPXO76031 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLPXO76031 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLPXO76031 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.42■□□□□ 0.06
CLPXO76031 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLPXO76031 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.42■□□□□ 0.06
CLPXO76031 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.42■□□□□ 0.06
CLPXO76031 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLPXO76031 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CLPXO76031 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLPXO76031 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CLPXO76031 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CLPXO76031 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CLPXO76031 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CLPXO76031 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.42■□□□□ 0.06
CLPXO76031 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.42■□□□□ 0.06
CLPXO76031 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.42■□□□□ 0.06
CLPXO76031 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLPXO76031 AC128688.1-201ENST00000487626 519 ntBASIC15.42■□□□□ 0.06
CLPXO76031 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.42■□□□□ 0.06
CLPXO76031 EGLN1P1-201ENST00000531623 762 ntBASIC15.42■□□□□ 0.06
CLPXO76031 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.42■□□□□ 0.06
CLPXO76031 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.42■□□□□ 0.06
CLPXO76031 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CLPXO76031 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
CLPXO76031 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLPXO76031 AL023803.3-201ENST00000615559 522 ntBASIC15.42■□□□□ 0.06
CLPXO76031 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLPXO76031 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLPXO76031 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLPXO76031 AC138035.3-201ENST00000622706 2791 ntBASIC15.42■□□□□ 0.06
CLPXO76031 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLPXO76031 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLPXO76031 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLPXO76031 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLPXO76031 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLPXO76031 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.42■□□□□ 0.06
CLPXO76031 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
CLPXO76031 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLPXO76031 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLPXO76031 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.42■□□□□ 0.06
CLPXO76031 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLPXO76031 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLPXO76031 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLPXO76031 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLPXO76031 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLPXO76031 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLPXO76031 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLPXO76031 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLPXO76031 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLPXO76031 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLPXO76031 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLPXO76031 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.41■□□□□ 0.06
CLPXO76031 NORAD-201ENST00000565493 5339 ntBASIC15.41■□□□□ 0.06
CLPXO76031 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLPXO76031 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLPXO76031 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC15.41■□□□□ 0.06
CLPXO76031 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC15.41■□□□□ 0.06
CLPXO76031 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLPXO76031 DUX4L26-201ENST00000489078 1255 ntBASIC15.41■□□□□ 0.06
CLPXO76031 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLPXO76031 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.41■□□□□ 0.06
CLPXO76031 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC15.41■□□□□ 0.06
CLPXO76031 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLPXO76031 AL353719.1-201ENST00000566847 864 ntBASIC15.41■□□□□ 0.06
CLPXO76031 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC15.41■□□□□ 0.06
CLPXO76031 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLPXO76031 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms