Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
PRAMEF4O60810 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEF4O60810 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEF4O60810 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.26■□□□□ 0.19
PRAMEF4O60810 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.26■□□□□ 0.19
PRAMEF4O60810 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEF4O60810 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.26■□□□□ 0.19
PRAMEF4O60810 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEF4O60810 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEF4O60810 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
PRAMEF4O60810 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEF4O60810 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.26■□□□□ 0.19
PRAMEF4O60810 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.26■□□□□ 0.19
PRAMEF4O60810 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.26■□□□□ 0.19
PRAMEF4O60810 AL662844.4-201ENST00000606367 2838 ntBASIC16.26■□□□□ 0.19
PRAMEF4O60810 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
PRAMEF4O60810 ALOX12P2-203ENST00000570921 1945 ntBASIC16.26■□□□□ 0.19
PRAMEF4O60810 PCDH8P1-201ENST00000428983 2773 ntBASIC16.26■□□□□ 0.19
PRAMEF4O60810 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEF4O60810 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEF4O60810 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEF4O60810 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEF4O60810 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
PRAMEF4O60810 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.26■□□□□ 0.19
PRAMEF4O60810 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.26■□□□□ 0.19
PRAMEF4O60810 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEF4O60810 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEF4O60810 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.26■□□□□ 0.19
PRAMEF4O60810 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEF4O60810 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.26■□□□□ 0.19
PRAMEF4O60810 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.26■□□□□ 0.19
PRAMEF4O60810 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.26■□□□□ 0.19
PRAMEF4O60810 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PRAMEF4O60810 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.26■□□□□ 0.19
PRAMEF4O60810 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEF4O60810 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
PRAMEF4O60810 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEF4O60810 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
PRAMEF4O60810 TNRC18P3-201ENST00000441896 2691 ntBASIC16.26■□□□□ 0.19
PRAMEF4O60810 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEF4O60810 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEF4O60810 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEF4O60810 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEF4O60810 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEF4O60810 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PRAMEF4O60810 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEF4O60810 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF4O60810 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PRAMEF4O60810 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.25■□□□□ 0.19
PRAMEF4O60810 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF4O60810 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.25■□□□□ 0.19
PRAMEF4O60810 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF4O60810 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF4O60810 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF4O60810 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF4O60810 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PRAMEF4O60810 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.25■□□□□ 0.19
PRAMEF4O60810 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.25■□□□□ 0.19
PRAMEF4O60810 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
PRAMEF4O60810 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PRAMEF4O60810 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF4O60810 AC108073.2-201ENST00000464002 357 ntBASIC16.25■□□□□ 0.19
PRAMEF4O60810 AC092910.1-201ENST00000482027 1129 ntBASIC16.25■□□□□ 0.19
PRAMEF4O60810 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.25■□□□□ 0.19
PRAMEF4O60810 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.25■□□□□ 0.19
PRAMEF4O60810 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.25■□□□□ 0.19
PRAMEF4O60810 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.25■□□□□ 0.19
PRAMEF4O60810 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.25■□□□□ 0.19
PRAMEF4O60810 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.25■□□□□ 0.19
PRAMEF4O60810 AC004790.2-201ENST00000623588 572 ntBASIC16.25■□□□□ 0.19
PRAMEF4O60810 AC116407.3-201ENST00000623905 1129 ntBASIC16.25■□□□□ 0.19
PRAMEF4O60810 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.25■□□□□ 0.19
PRAMEF4O60810 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF4O60810 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF4O60810 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF4O60810 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.25■□□□□ 0.19
PRAMEF4O60810 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
PRAMEF4O60810 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF4O60810 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF4O60810 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.25■□□□□ 0.19
PRAMEF4O60810 AC006538.1-201ENST00000567905 1585 ntBASIC16.25■□□□□ 0.19
PRAMEF4O60810 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF4O60810 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PRAMEF4O60810 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF4O60810 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.25■□□□□ 0.19
PRAMEF4O60810 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF4O60810 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.25■□□□□ 0.19
PRAMEF4O60810 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF4O60810 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
PRAMEF4O60810 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF4O60810 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.24■□□□□ 0.19
PRAMEF4O60810 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF4O60810 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF4O60810 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF4O60810 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF4O60810 HLA-A-201ENST00000376802 1334 ntBASIC16.24■□□□□ 0.19
PRAMEF4O60810 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF4O60810 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF4O60810 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF4O60810 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms