Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EXTL3O43909 AC078925.2-201ENST00000624013 1973 ntBASIC18.32■□□□□ 0.52
EXTL3O43909 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
EXTL3O43909 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
EXTL3O43909 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
EXTL3O43909 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.32■□□□□ 0.52
EXTL3O43909 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
EXTL3O43909 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.32■□□□□ 0.52
EXTL3O43909 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
EXTL3O43909 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
EXTL3O43909 CYP2A7P1-201ENST00000595391 815 ntBASIC18.32■□□□□ 0.52
EXTL3O43909 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.32■□□□□ 0.52
EXTL3O43909 AP001350.2-201ENST00000625104 1094 ntBASIC18.32■□□□□ 0.52
EXTL3O43909 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EXTL3O43909 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.32■□□□□ 0.52
EXTL3O43909 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.32■□□□□ 0.52
EXTL3O43909 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EXTL3O43909 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
EXTL3O43909 PRORSD1P-202ENST00000563365 2154 ntBASIC18.32■□□□□ 0.52
EXTL3O43909 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.32■□□□□ 0.52
EXTL3O43909 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.32■□□□□ 0.52
EXTL3O43909 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.32■□□□□ 0.52
EXTL3O43909 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EXTL3O43909 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
EXTL3O43909 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
EXTL3O43909 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EXTL3O43909 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EXTL3O43909 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EXTL3O43909 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
EXTL3O43909 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
EXTL3O43909 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
EXTL3O43909 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EXTL3O43909 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EXTL3O43909 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EXTL3O43909 RNF216P1-203ENST00000404404 2427 ntBASIC18.31■□□□□ 0.52
EXTL3O43909 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EXTL3O43909 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EXTL3O43909 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
EXTL3O43909 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EXTL3O43909 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
EXTL3O43909 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
EXTL3O43909 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EXTL3O43909 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
EXTL3O43909 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
EXTL3O43909 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.31■□□□□ 0.52
EXTL3O43909 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
EXTL3O43909 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.31■□□□□ 0.52
EXTL3O43909 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
EXTL3O43909 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.31■□□□□ 0.52
EXTL3O43909 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.31■□□□□ 0.52
EXTL3O43909 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.31■□□□□ 0.52
EXTL3O43909 PGAM5P1-201ENST00000518923 814 ntBASIC18.31■□□□□ 0.52
EXTL3O43909 KRT19P2-202ENST00000557173 1012 ntBASIC18.31■□□□□ 0.52
EXTL3O43909 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.31■□□□□ 0.52
EXTL3O43909 AL031432.2-201ENST00000566714 459 ntBASIC18.31■□□□□ 0.52
EXTL3O43909 AL928711.1-201ENST00000570165 459 ntBASIC18.31■□□□□ 0.52
EXTL3O43909 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.31■□□□□ 0.52
EXTL3O43909 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EXTL3O43909 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
EXTL3O43909 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EXTL3O43909 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EXTL3O43909 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
EXTL3O43909 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.31■□□□□ 0.52
EXTL3O43909 AC025580.3-201ENST00000617932 1424 ntBASIC18.31■□□□□ 0.52
EXTL3O43909 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.31■□□□□ 0.52
EXTL3O43909 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.31■□□□□ 0.52
EXTL3O43909 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
EXTL3O43909 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
EXTL3O43909 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EXTL3O43909 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EXTL3O43909 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
EXTL3O43909 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
EXTL3O43909 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
EXTL3O43909 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
EXTL3O43909 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
EXTL3O43909 PKD1P1-201ENST00000458669 6805 ntBASIC18.3■□□□□ 0.52
EXTL3O43909 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EXTL3O43909 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
EXTL3O43909 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
EXTL3O43909 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
EXTL3O43909 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.3■□□□□ 0.52
EXTL3O43909 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
EXTL3O43909 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.3■□□□□ 0.52
EXTL3O43909 AL139011.1-202ENST00000642063 584 ntBASIC18.3■□□□□ 0.52
EXTL3O43909 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
EXTL3O43909 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.3■□□□□ 0.52
EXTL3O43909 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.3■□□□□ 0.52
EXTL3O43909 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
EXTL3O43909 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EXTL3O43909 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.3■□□□□ 0.52
EXTL3O43909 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EXTL3O43909 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
EXTL3O43909 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
EXTL3O43909 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EXTL3O43909 PCDHA12-202ENST00000613593 2588 ntBASIC18.3■□□□□ 0.52
EXTL3O43909 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EXTL3O43909 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
EXTL3O43909 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EXTL3O43909 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
EXTL3O43909 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms