Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.11■□□□□ 0.33
KDELR3O43731 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.11■□□□□ 0.33
KDELR3O43731 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.11■□□□□ 0.33
KDELR3O43731 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.11■□□□□ 0.33
KDELR3O43731 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
KDELR3O43731 AL139011.1-202ENST00000642063 584 ntBASIC17.11■□□□□ 0.33
KDELR3O43731 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KDELR3O43731 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KDELR3O43731 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KDELR3O43731 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KDELR3O43731 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
KDELR3O43731 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.11■□□□□ 0.33
KDELR3O43731 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KDELR3O43731 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
KDELR3O43731 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KDELR3O43731 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KDELR3O43731 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
KDELR3O43731 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KDELR3O43731 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KDELR3O43731 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDELR3O43731 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
KDELR3O43731 AC092919.2-201ENST00000623631 1645 ntBASIC17.1■□□□□ 0.33
KDELR3O43731 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDELR3O43731 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KDELR3O43731 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.1■□□□□ 0.33
KDELR3O43731 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDELR3O43731 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KDELR3O43731 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
KDELR3O43731 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KDELR3O43731 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KDELR3O43731 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDELR3O43731 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDELR3O43731 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
KDELR3O43731 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDELR3O43731 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDELR3O43731 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDELR3O43731 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.1■□□□□ 0.33
KDELR3O43731 RNU1-129P-201ENST00000384064 167 ntBASIC17.1■□□□□ 0.33
KDELR3O43731 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDELR3O43731 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.1■□□□□ 0.33
KDELR3O43731 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.1■□□□□ 0.33
KDELR3O43731 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.1■□□□□ 0.33
KDELR3O43731 AC092865.5-201ENST00000545435 363 ntBASIC17.1■□□□□ 0.33
KDELR3O43731 U1.21-201ENST00000580816 167 ntBASIC17.1■□□□□ 0.33
KDELR3O43731 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.1■□□□□ 0.33
KDELR3O43731 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDELR3O43731 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.1■□□□□ 0.33
KDELR3O43731 C20orf181-201ENST00000623918 480 ntBASIC17.1■□□□□ 0.33
KDELR3O43731 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
KDELR3O43731 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDELR3O43731 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.1■□□□□ 0.33
KDELR3O43731 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
KDELR3O43731 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDELR3O43731 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
KDELR3O43731 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KDELR3O43731 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDELR3O43731 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.1■□□□□ 0.33
KDELR3O43731 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDELR3O43731 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.1■□□□□ 0.33
KDELR3O43731 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDELR3O43731 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
KDELR3O43731 SNX33P1-201ENST00000592116 1762 ntBASIC17.1■□□□□ 0.33
KDELR3O43731 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KDELR3O43731 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
KDELR3O43731 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.09■□□□□ 0.33
KDELR3O43731 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.09■□□□□ 0.33
KDELR3O43731 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
KDELR3O43731 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KDELR3O43731 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
KDELR3O43731 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KDELR3O43731 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
KDELR3O43731 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
KDELR3O43731 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KDELR3O43731 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
KDELR3O43731 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
KDELR3O43731 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.09■□□□□ 0.33
KDELR3O43731 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.09■□□□□ 0.33
KDELR3O43731 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.09■□□□□ 0.33
KDELR3O43731 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.09■□□□□ 0.33
KDELR3O43731 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
KDELR3O43731 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KDELR3O43731 KRT8P39-201ENST00000396270 1433 ntBASIC17.09■□□□□ 0.33
KDELR3O43731 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KDELR3O43731 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
KDELR3O43731 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.09■□□□□ 0.33
KDELR3O43731 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
KDELR3O43731 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KDELR3O43731 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.09■□□□□ 0.33
KDELR3O43731 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
KDELR3O43731 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
KDELR3O43731 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
KDELR3O43731 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
KDELR3O43731 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KDELR3O43731 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KDELR3O43731 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
KDELR3O43731 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KDELR3O43731 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
KDELR3O43731 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
KDELR3O43731 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.08■□□□□ 0.33
KDELR3O43731 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms