Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17■□□□□ 0.31
PFDN6O15212 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PFDN6O15212 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17■□□□□ 0.31
PFDN6O15212 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17■□□□□ 0.31
PFDN6O15212 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PFDN6O15212 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PFDN6O15212 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PFDN6O15212 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PFDN6O15212 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17■□□□□ 0.31
PFDN6O15212 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PFDN6O15212 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PFDN6O15212 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PFDN6O15212 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
PFDN6O15212 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PFDN6O15212 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PFDN6O15212 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PFDN6O15212 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PFDN6O15212 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PFDN6O15212 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PFDN6O15212 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PFDN6O15212 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
PFDN6O15212 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.99■□□□□ 0.31
PFDN6O15212 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PFDN6O15212 FGFR3P6-201ENST00000457012 610 ntBASIC16.99■□□□□ 0.31
PFDN6O15212 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.99■□□□□ 0.31
PFDN6O15212 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.99■□□□□ 0.31
PFDN6O15212 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.99■□□□□ 0.31
PFDN6O15212 CLEC4GP1-201ENST00000596555 870 ntBASIC16.99■□□□□ 0.31
PFDN6O15212 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.99■□□□□ 0.31
PFDN6O15212 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PFDN6O15212 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PFDN6O15212 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PFDN6O15212 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PFDN6O15212 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.99■□□□□ 0.31
PFDN6O15212 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PFDN6O15212 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PFDN6O15212 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.99■□□□□ 0.31
PFDN6O15212 AC005915.1-201ENST00000624912 2018 ntBASIC16.99■□□□□ 0.31
PFDN6O15212 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PFDN6O15212 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PFDN6O15212 AL590787.1-201ENST00000568856 1315 ntBASIC16.98■□□□□ 0.31
PFDN6O15212 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PFDN6O15212 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PFDN6O15212 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PFDN6O15212 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PFDN6O15212 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PFDN6O15212 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PFDN6O15212 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PFDN6O15212 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PFDN6O15212 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PFDN6O15212 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PFDN6O15212 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PFDN6O15212 AP002414.1-201ENST00000391405 1147 ntBASIC16.98■□□□□ 0.31
PFDN6O15212 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PFDN6O15212 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.98■□□□□ 0.31
PFDN6O15212 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.98■□□□□ 0.31
PFDN6O15212 AC006557.2-201ENST00000592985 1240 ntBASIC16.98■□□□□ 0.31
PFDN6O15212 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.98■□□□□ 0.31
PFDN6O15212 AC064862.7-201ENST00000604520 867 ntBASIC16.98■□□□□ 0.31
PFDN6O15212 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.98■□□□□ 0.31
PFDN6O15212 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.98■□□□□ 0.31
PFDN6O15212 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.98■□□□□ 0.31
PFDN6O15212 NKILA-202ENST00000614771 2598 ntBASIC16.98■□□□□ 0.31
PFDN6O15212 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
PFDN6O15212 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PFDN6O15212 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PFDN6O15212 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
PFDN6O15212 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PFDN6O15212 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.98■□□□□ 0.31
PFDN6O15212 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PFDN6O15212 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.98■□□□□ 0.31
PFDN6O15212 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.98■□□□□ 0.31
PFDN6O15212 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.98■□□□□ 0.31
PFDN6O15212 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PFDN6O15212 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PFDN6O15212 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PFDN6O15212 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PFDN6O15212 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PFDN6O15212 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PFDN6O15212 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PFDN6O15212 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.97■□□□□ 0.31
PFDN6O15212 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PFDN6O15212 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PFDN6O15212 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.97■□□□□ 0.31
PFDN6O15212 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PFDN6O15212 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PFDN6O15212 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PFDN6O15212 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PFDN6O15212 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.97■□□□□ 0.31
PFDN6O15212 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PFDN6O15212 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PFDN6O15212 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PFDN6O15212 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PFDN6O15212 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PFDN6O15212 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.97■□□□□ 0.31
PFDN6O15212 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.97■□□□□ 0.31
PFDN6O15212 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.97■□□□□ 0.31
PFDN6O15212 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.97■□□□□ 0.31
PFDN6O15212 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PFDN6O15212 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms