Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UPK2O00526 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
UPK2O00526 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC13.6□□□□□ -0.23
UPK2O00526 AC006538.1-201ENST00000567905 1585 ntBASIC13.6□□□□□ -0.23
UPK2O00526 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC13.6□□□□□ -0.23
UPK2O00526 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UPK2O00526 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UPK2O00526 AC138894.3-201ENST00000603787 634 ntBASIC13.6□□□□□ -0.23
UPK2O00526 AP001269.4-201ENST00000609611 512 ntBASIC13.6□□□□□ -0.23
UPK2O00526 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
UPK2O00526 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UPK2O00526 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UPK2O00526 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
UPK2O00526 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UPK2O00526 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13.6□□□□□ -0.23
UPK2O00526 NFIC-211ENST00000641145 8399 ntBASIC13.6□□□□□ -0.23
UPK2O00526 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
UPK2O00526 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UPK2O00526 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC13.6□□□□□ -0.23
UPK2O00526 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC13.6□□□□□ -0.23
UPK2O00526 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
UPK2O00526 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UPK2O00526 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UPK2O00526 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
UPK2O00526 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UPK2O00526 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UPK2O00526 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UPK2O00526 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC13.59□□□□□ -0.23
UPK2O00526 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.59□□□□□ -0.23
UPK2O00526 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC13.59□□□□□ -0.23
UPK2O00526 PC-204ENST00000524491 1714 ntTSL 2 BASIC13.59□□□□□ -0.23
UPK2O00526 AC079328.2-201ENST00000561241 3354 ntBASIC13.59□□□□□ -0.23
UPK2O00526 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
UPK2O00526 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
UPK2O00526 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.59□□□□□ -0.23
UPK2O00526 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
UPK2O00526 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
UPK2O00526 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UPK2O00526 NCF1C-201ENST00000438382 1427 ntBASIC13.59□□□□□ -0.23
UPK2O00526 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC13.59□□□□□ -0.23
UPK2O00526 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UPK2O00526 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
UPK2O00526 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
UPK2O00526 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
UPK2O00526 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
UPK2O00526 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC13.59□□□□□ -0.23
UPK2O00526 ABBA01031661.1-201ENST00000634362 1253 ntBASIC13.59□□□□□ -0.23
UPK2O00526 AL022326.1-202ENST00000641533 845 ntBASIC13.59□□□□□ -0.23
UPK2O00526 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UPK2O00526 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
UPK2O00526 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
UPK2O00526 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
UPK2O00526 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
UPK2O00526 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UPK2O00526 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
UPK2O00526 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UPK2O00526 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UPK2O00526 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
UPK2O00526 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UPK2O00526 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UPK2O00526 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UPK2O00526 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
UPK2O00526 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
UPK2O00526 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.23
UPK2O00526 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
UPK2O00526 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
UPK2O00526 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC13.58□□□□□ -0.24
UPK2O00526 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
UPK2O00526 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
UPK2O00526 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
UPK2O00526 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UPK2O00526 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
UPK2O00526 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UPK2O00526 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UPK2O00526 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
UPK2O00526 OVCH1-AS1-204ENST00000641955 5529 ntBASIC13.58□□□□□ -0.24
UPK2O00526 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
UPK2O00526 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UPK2O00526 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UPK2O00526 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
UPK2O00526 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC13.58□□□□□ -0.24
UPK2O00526 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
UPK2O00526 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC13.58□□□□□ -0.24
UPK2O00526 AC106795.1-205ENST00000512851 1056 ntBASIC13.58□□□□□ -0.24
UPK2O00526 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC13.58□□□□□ -0.24
UPK2O00526 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC13.58□□□□□ -0.24
UPK2O00526 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
UPK2O00526 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
UPK2O00526 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC13.58□□□□□ -0.24
UPK2O00526 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
UPK2O00526 IGHV3OR16-7-201ENST00000604106 360 ntBASIC13.58□□□□□ -0.24
UPK2O00526 AC064862.7-201ENST00000604520 867 ntBASIC13.58□□□□□ -0.24
UPK2O00526 AC013467.2-201ENST00000605472 835 ntBASIC13.58□□□□□ -0.24
UPK2O00526 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC13.58□□□□□ -0.24
UPK2O00526 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC13.58□□□□□ -0.24
UPK2O00526 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
UPK2O00526 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC13.58□□□□□ -0.24
UPK2O00526 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
UPK2O00526 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
UPK2O00526 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms