Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
MBD3L3A6NE82 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.77□□□□□ -0.04
MBD3L3A6NE82 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
MBD3L3A6NE82 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
MBD3L3A6NE82 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
MBD3L3A6NE82 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
MBD3L3A6NE82 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
MBD3L3A6NE82 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.77□□□□□ -0.04
MBD3L3A6NE82 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.77□□□□□ -0.04
MBD3L3A6NE82 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
MBD3L3A6NE82 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
MBD3L3A6NE82 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
MBD3L3A6NE82 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.05
MBD3L3A6NE82 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
MBD3L3A6NE82 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.77□□□□□ -0.05
MBD3L3A6NE82 FAM8A3P-201ENST00000427218 844 ntBASIC14.77□□□□□ -0.05
MBD3L3A6NE82 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.77□□□□□ -0.05
MBD3L3A6NE82 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.77□□□□□ -0.05
MBD3L3A6NE82 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.77□□□□□ -0.05
MBD3L3A6NE82 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.77□□□□□ -0.05
MBD3L3A6NE82 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
MBD3L3A6NE82 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.77□□□□□ -0.05
MBD3L3A6NE82 AC092364.2-202ENST00000597012 1073 ntBASIC14.77□□□□□ -0.05
MBD3L3A6NE82 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.77□□□□□ -0.05
MBD3L3A6NE82 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.77□□□□□ -0.05
MBD3L3A6NE82 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
MBD3L3A6NE82 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
MBD3L3A6NE82 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC14.77□□□□□ -0.05
MBD3L3A6NE82 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
MBD3L3A6NE82 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
MBD3L3A6NE82 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
MBD3L3A6NE82 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC14.77□□□□□ -0.05
MBD3L3A6NE82 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
MBD3L3A6NE82 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
MBD3L3A6NE82 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
MBD3L3A6NE82 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 AC107890.1-201ENST00000422478 521 ntBASIC14.76□□□□□ -0.05
MBD3L3A6NE82 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 AC142381.1-201ENST00000426099 345 ntBASIC14.76□□□□□ -0.05
MBD3L3A6NE82 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 BCRP1-201ENST00000444246 691 ntBASIC14.76□□□□□ -0.05
MBD3L3A6NE82 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 AC125807.1-201ENST00000483097 614 ntBASIC14.76□□□□□ -0.05
MBD3L3A6NE82 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 AP002490.2-201ENST00000524791 560 ntBASIC14.76□□□□□ -0.05
MBD3L3A6NE82 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 DUX4L27-201ENST00000554796 1261 ntBASIC14.76□□□□□ -0.05
MBD3L3A6NE82 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 AL138918.1-201ENST00000568306 659 ntBASIC14.76□□□□□ -0.05
MBD3L3A6NE82 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 LINC02084-201ENST00000606069 1096 ntBASIC14.76□□□□□ -0.05
MBD3L3A6NE82 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
MBD3L3A6NE82 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MBD3L3A6NE82 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
MBD3L3A6NE82 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
MBD3L3A6NE82 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
MBD3L3A6NE82 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MBD3L3A6NE82 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MBD3L3A6NE82 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
MBD3L3A6NE82 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms