Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
LINC01558Q9Y6Z2 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
LINC01558Q9Y6Z2 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
LINC01558Q9Y6Z2 AC136621.1-201ENST00000624017 2304 ntBASIC8.73□□□□□ -1.01
LINC01558Q9Y6Z2 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
LINC01558Q9Y6Z2 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC8.73□□□□□ -1.01
LINC01558Q9Y6Z2 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
LINC01558Q9Y6Z2 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC8.73□□□□□ -1.01
LINC01558Q9Y6Z2 MACF1-219ENST00000484793 834 ntTSL 2 BASIC8.73□□□□□ -1.01
LINC01558Q9Y6Z2 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
LINC01558Q9Y6Z2 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
LINC01558Q9Y6Z2 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC8.73□□□□□ -1.01
LINC01558Q9Y6Z2 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC8.73□□□□□ -1.01
LINC01558Q9Y6Z2 FGF8-207ENST00000618991 856 ntTSL 3 BASIC8.73□□□□□ -1.01
LINC01558Q9Y6Z2 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC8.73□□□□□ -1.01
LINC01558Q9Y6Z2 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
LINC01558Q9Y6Z2 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
LINC01558Q9Y6Z2 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
LINC01558Q9Y6Z2 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
LINC01558Q9Y6Z2 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
LINC01558Q9Y6Z2 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC8.73□□□□□ -1.01
LINC01558Q9Y6Z2 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC8.73□□□□□ -1.01
LINC01558Q9Y6Z2 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC8.73□□□□□ -1.01
LINC01558Q9Y6Z2 AL359881.3-201ENST00000602640 1721 ntBASIC8.73□□□□□ -1.01
LINC01558Q9Y6Z2 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
LINC01558Q9Y6Z2 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC8.73□□□□□ -1.01
LINC01558Q9Y6Z2 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
LINC01558Q9Y6Z2 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
LINC01558Q9Y6Z2 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
LINC01558Q9Y6Z2 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
LINC01558Q9Y6Z2 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
LINC01558Q9Y6Z2 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
LINC01558Q9Y6Z2 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
LINC01558Q9Y6Z2 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
LINC01558Q9Y6Z2 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
LINC01558Q9Y6Z2 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
LINC01558Q9Y6Z2 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
LINC01558Q9Y6Z2 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC8.73□□□□□ -1.01
LINC01558Q9Y6Z2 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC8.73□□□□□ -1.01
LINC01558Q9Y6Z2 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC8.73□□□□□ -1.01
LINC01558Q9Y6Z2 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC8.73□□□□□ -1.01
LINC01558Q9Y6Z2 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC8.73□□□□□ -1.01
LINC01558Q9Y6Z2 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 AL391256.1-201ENST00000443260 1855 ntBASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 GOLGA6L3-201ENST00000507199 1679 ntBASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 COCH-203ENST00000460581 2688 ntTSL 2 BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 AP002490.2-201ENST00000524791 560 ntBASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 AC116407.2-201ENST00000613639 860 ntBASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 MROH4P-201ENST00000431302 1578 ntBASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 AC079776.2-201ENST00000641154 1609 ntBASIC8.72□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms