Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CDC42BPBQ9Y5S2 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC25.17■■□□□ 1.62
CDC42BPBQ9Y5S2 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CDC42BPBQ9Y5S2 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC25.17■■□□□ 1.62
CDC42BPBQ9Y5S2 MAX-210ENST00000555419 765 ntTSL 5 BASIC25.17■■□□□ 1.62
CDC42BPBQ9Y5S2 NAA38-207ENST00000576861 556 ntTSL 3 BASIC25.17■■□□□ 1.62
CDC42BPBQ9Y5S2 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC25.17■■□□□ 1.62
CDC42BPBQ9Y5S2 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CDC42BPBQ9Y5S2 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CDC42BPBQ9Y5S2 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CDC42BPBQ9Y5S2 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CDC42BPBQ9Y5S2 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC25.16■■□□□ 1.62
CDC42BPBQ9Y5S2 PC-204ENST00000524491 1714 ntTSL 2 BASIC25.16■■□□□ 1.62
CDC42BPBQ9Y5S2 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC25.16■■□□□ 1.62
CDC42BPBQ9Y5S2 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CDC42BPBQ9Y5S2 DPM2-202ENST00000373110 738 ntTSL 2 BASIC25.16■■□□□ 1.62
CDC42BPBQ9Y5S2 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC25.16■■□□□ 1.62
CDC42BPBQ9Y5S2 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
CDC42BPBQ9Y5S2 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC25.16■■□□□ 1.62
CDC42BPBQ9Y5S2 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CDC42BPBQ9Y5S2 APOC4-201ENST00000591600 348 ntTSL 3 BASIC25.16■■□□□ 1.62
CDC42BPBQ9Y5S2 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
CDC42BPBQ9Y5S2 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CDC42BPBQ9Y5S2 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
CDC42BPBQ9Y5S2 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC25.16■■□□□ 1.62
CDC42BPBQ9Y5S2 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CDC42BPBQ9Y5S2 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CDC42BPBQ9Y5S2 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CDC42BPBQ9Y5S2 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
CDC42BPBQ9Y5S2 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC25.16■■□□□ 1.62
CDC42BPBQ9Y5S2 IMPDH1P4-201ENST00000445028 1534 ntBASIC25.16■■□□□ 1.62
CDC42BPBQ9Y5S2 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC25.16■■□□□ 1.62
CDC42BPBQ9Y5S2 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC25.16■■□□□ 1.62
CDC42BPBQ9Y5S2 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CDC42BPBQ9Y5S2 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC25.16■■□□□ 1.62
CDC42BPBQ9Y5S2 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC25.15■■□□□ 1.62
CDC42BPBQ9Y5S2 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CDC42BPBQ9Y5S2 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CDC42BPBQ9Y5S2 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CDC42BPBQ9Y5S2 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
CDC42BPBQ9Y5S2 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
CDC42BPBQ9Y5S2 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CDC42BPBQ9Y5S2 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
CDC42BPBQ9Y5S2 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CDC42BPBQ9Y5S2 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CDC42BPBQ9Y5S2 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC25.15■■□□□ 1.62
CDC42BPBQ9Y5S2 AC023310.3-201ENST00000557027 670 ntBASIC25.15■■□□□ 1.62
CDC42BPBQ9Y5S2 AC100756.1-201ENST00000562736 682 ntBASIC25.15■■□□□ 1.62
CDC42BPBQ9Y5S2 AC138749.3-201ENST00000567691 622 ntBASIC25.15■■□□□ 1.62
CDC42BPBQ9Y5S2 AC116165.1-201ENST00000611806 668 ntBASIC25.15■■□□□ 1.62
CDC42BPBQ9Y5S2 5S_rRNA.22-201ENST00000614916 106 ntBASIC25.15■■□□□ 1.62
CDC42BPBQ9Y5S2 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CDC42BPBQ9Y5S2 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CDC42BPBQ9Y5S2 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CDC42BPBQ9Y5S2 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CDC42BPBQ9Y5S2 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
CDC42BPBQ9Y5S2 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
CDC42BPBQ9Y5S2 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CDC42BPBQ9Y5S2 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC25.15■■□□□ 1.62
CDC42BPBQ9Y5S2 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CDC42BPBQ9Y5S2 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CDC42BPBQ9Y5S2 AC006277.1-201ENST00000624348 1610 ntBASIC25.15■■□□□ 1.62
CDC42BPBQ9Y5S2 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
CDC42BPBQ9Y5S2 AC098614.1-201ENST00000368528 745 ntBASIC25.15■■□□□ 1.62
CDC42BPBQ9Y5S2 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC25.15■■□□□ 1.62
CDC42BPBQ9Y5S2 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
CDC42BPBQ9Y5S2 AC098859.1-201ENST00000502915 1238 ntBASIC25.15■■□□□ 1.62
CDC42BPBQ9Y5S2 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CDC42BPBQ9Y5S2 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC25.15■■□□□ 1.62
CDC42BPBQ9Y5S2 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC25.15■■□□□ 1.62
CDC42BPBQ9Y5S2 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC25.14■■□□□ 1.62
CDC42BPBQ9Y5S2 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CDC42BPBQ9Y5S2 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC25.14■■□□□ 1.62
CDC42BPBQ9Y5S2 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CDC42BPBQ9Y5S2 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CDC42BPBQ9Y5S2 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC25.14■■□□□ 1.62
CDC42BPBQ9Y5S2 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CDC42BPBQ9Y5S2 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
CDC42BPBQ9Y5S2 AL023806.1-201ENST00000603994 1649 ntBASIC25.14■■□□□ 1.62
CDC42BPBQ9Y5S2 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.61
CDC42BPBQ9Y5S2 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC25.14■■□□□ 1.61
CDC42BPBQ9Y5S2 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC25.14■■□□□ 1.61
CDC42BPBQ9Y5S2 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
CDC42BPBQ9Y5S2 MXI1-205ENST00000393134 889 ntTSL 2 BASIC25.14■■□□□ 1.61
CDC42BPBQ9Y5S2 AC098850.1-201ENST00000419919 790 ntBASIC25.14■■□□□ 1.61
CDC42BPBQ9Y5S2 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC25.14■■□□□ 1.61
CDC42BPBQ9Y5S2 AL589987.1-201ENST00000453380 819 ntBASIC25.14■■□□□ 1.61
CDC42BPBQ9Y5S2 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC25.14■■□□□ 1.61
CDC42BPBQ9Y5S2 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC25.14■■□□□ 1.61
CDC42BPBQ9Y5S2 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC25.14■■□□□ 1.61
CDC42BPBQ9Y5S2 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC25.14■■□□□ 1.61
CDC42BPBQ9Y5S2 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC25.13■■□□□ 1.61
CDC42BPBQ9Y5S2 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC25.13■■□□□ 1.61
CDC42BPBQ9Y5S2 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CDC42BPBQ9Y5S2 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC25.13■■□□□ 1.61
CDC42BPBQ9Y5S2 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC25.13■■□□□ 1.61
CDC42BPBQ9Y5S2 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CDC42BPBQ9Y5S2 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
CDC42BPBQ9Y5S2 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC25.13■■□□□ 1.61
CDC42BPBQ9Y5S2 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms