Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA11Q9Y5H2 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA11Q9Y5H2 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PCDHGA11Q9Y5H2 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA11Q9Y5H2 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
PCDHGA11Q9Y5H2 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA11Q9Y5H2 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PCDHGA11Q9Y5H2 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.47■□□□□ 0.23
PCDHGA11Q9Y5H2 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDHGA11Q9Y5H2 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA11Q9Y5H2 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDHGA11Q9Y5H2 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA11Q9Y5H2 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PCDHGA11Q9Y5H2 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA11Q9Y5H2 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA11Q9Y5H2 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA11Q9Y5H2 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA11Q9Y5H2 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA11Q9Y5H2 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA11Q9Y5H2 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA11Q9Y5H2 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA11Q9Y5H2 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA11Q9Y5H2 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PCDHGA11Q9Y5H2 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PCDHGA11Q9Y5H2 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA11Q9Y5H2 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDHGA11Q9Y5H2 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA11Q9Y5H2 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.46■□□□□ 0.23
PCDHGA11Q9Y5H2 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PCDHGA11Q9Y5H2 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA11Q9Y5H2 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.46■□□□□ 0.23
PCDHGA11Q9Y5H2 AP002490.2-201ENST00000524791 560 ntBASIC16.46■□□□□ 0.23
PCDHGA11Q9Y5H2 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.46■□□□□ 0.23
PCDHGA11Q9Y5H2 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDHGA11Q9Y5H2 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.46■□□□□ 0.23
PCDHGA11Q9Y5H2 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA11Q9Y5H2 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDHGA11Q9Y5H2 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDHGA11Q9Y5H2 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PCDHGA11Q9Y5H2 CROCCP1-201ENST00000426910 5675 ntBASIC16.46■□□□□ 0.23
PCDHGA11Q9Y5H2 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA11Q9Y5H2 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA11Q9Y5H2 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA11Q9Y5H2 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA11Q9Y5H2 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDHGA11Q9Y5H2 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PCDHGA11Q9Y5H2 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PCDHGA11Q9Y5H2 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDHGA11Q9Y5H2 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA11Q9Y5H2 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PCDHGA11Q9Y5H2 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
PCDHGA11Q9Y5H2 LINC02199-201ENST00000506655 2702 ntBASIC16.46■□□□□ 0.22
PCDHGA11Q9Y5H2 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PCDHGA11Q9Y5H2 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
PCDHGA11Q9Y5H2 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PCDHGA11Q9Y5H2 AL590787.1-201ENST00000568856 1315 ntBASIC16.45■□□□□ 0.22
PCDHGA11Q9Y5H2 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PCDHGA11Q9Y5H2 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA11Q9Y5H2 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
PCDHGA11Q9Y5H2 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA11Q9Y5H2 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDHGA11Q9Y5H2 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA11Q9Y5H2 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDHGA11Q9Y5H2 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDHGA11Q9Y5H2 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA11Q9Y5H2 AC068418.2-201ENST00000577309 3703 ntBASIC16.45■□□□□ 0.22
PCDHGA11Q9Y5H2 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA11Q9Y5H2 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA11Q9Y5H2 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA11Q9Y5H2 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA11Q9Y5H2 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA11Q9Y5H2 AP002414.1-201ENST00000391405 1147 ntBASIC16.45■□□□□ 0.22
PCDHGA11Q9Y5H2 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.45■□□□□ 0.22
PCDHGA11Q9Y5H2 SAPCD2P3-201ENST00000455031 850 ntBASIC16.45■□□□□ 0.22
PCDHGA11Q9Y5H2 FGFR3P6-201ENST00000457012 610 ntBASIC16.45■□□□□ 0.22
PCDHGA11Q9Y5H2 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PCDHGA11Q9Y5H2 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA11Q9Y5H2 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.45■□□□□ 0.22
PCDHGA11Q9Y5H2 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDHGA11Q9Y5H2 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.45■□□□□ 0.22
PCDHGA11Q9Y5H2 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDHGA11Q9Y5H2 AC064862.7-201ENST00000604520 867 ntBASIC16.45■□□□□ 0.22
PCDHGA11Q9Y5H2 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA11Q9Y5H2 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PCDHGA11Q9Y5H2 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PCDHGA11Q9Y5H2 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA11Q9Y5H2 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
PCDHGA11Q9Y5H2 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA11Q9Y5H2 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA11Q9Y5H2 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA11Q9Y5H2 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA11Q9Y5H2 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDHGA11Q9Y5H2 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA11Q9Y5H2 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA11Q9Y5H2 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PCDHGA11Q9Y5H2 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA11Q9Y5H2 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA11Q9Y5H2 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
PCDHGA11Q9Y5H2 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHGA11Q9Y5H2 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms