Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB3Q9Y5G1 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB3Q9Y5G1 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PCDHGB3Q9Y5G1 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB3Q9Y5G1 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PCDHGB3Q9Y5G1 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.15■□□□□ 0.18
PCDHGB3Q9Y5G1 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
PCDHGB3Q9Y5G1 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
PCDHGB3Q9Y5G1 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB3Q9Y5G1 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
PCDHGB3Q9Y5G1 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB3Q9Y5G1 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB3Q9Y5G1 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGB3Q9Y5G1 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB3Q9Y5G1 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PCDHGB3Q9Y5G1 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGB3Q9Y5G1 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB3Q9Y5G1 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB3Q9Y5G1 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHGB3Q9Y5G1 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PCDHGB3Q9Y5G1 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB3Q9Y5G1 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB3Q9Y5G1 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGB3Q9Y5G1 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB3Q9Y5G1 AC079781.3-201ENST00000449110 356 ntBASIC16.14■□□□□ 0.17
PCDHGB3Q9Y5G1 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.14■□□□□ 0.17
PCDHGB3Q9Y5G1 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB3Q9Y5G1 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB3Q9Y5G1 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PCDHGB3Q9Y5G1 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB3Q9Y5G1 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB3Q9Y5G1 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB3Q9Y5G1 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB3Q9Y5G1 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB3Q9Y5G1 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB3Q9Y5G1 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB3Q9Y5G1 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB3Q9Y5G1 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGB3Q9Y5G1 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB3Q9Y5G1 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB3Q9Y5G1 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB3Q9Y5G1 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB3Q9Y5G1 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB3Q9Y5G1 AC092053.1-201ENST00000605787 1936 ntBASIC16.13■□□□□ 0.17
PCDHGB3Q9Y5G1 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGB3Q9Y5G1 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PCDHGB3Q9Y5G1 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.13■□□□□ 0.17
PCDHGB3Q9Y5G1 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGB3Q9Y5G1 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGB3Q9Y5G1 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
PCDHGB3Q9Y5G1 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGB3Q9Y5G1 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDHGB3Q9Y5G1 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGB3Q9Y5G1 AC132938.5-201ENST00000624980 1813 ntBASIC16.13■□□□□ 0.17
PCDHGB3Q9Y5G1 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGB3Q9Y5G1 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGB3Q9Y5G1 AKR1C7P-201ENST00000305623 895 ntBASIC16.13■□□□□ 0.17
PCDHGB3Q9Y5G1 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGB3Q9Y5G1 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.13■□□□□ 0.17
PCDHGB3Q9Y5G1 SLC25A1P3-201ENST00000395415 828 ntBASIC16.13■□□□□ 0.17
PCDHGB3Q9Y5G1 AL020989.1-201ENST00000422979 469 ntBASIC16.13■□□□□ 0.17
PCDHGB3Q9Y5G1 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDHGB3Q9Y5G1 SIGLEC30P-201ENST00000455569 941 ntBASIC16.13■□□□□ 0.17
PCDHGB3Q9Y5G1 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PCDHGB3Q9Y5G1 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.13■□□□□ 0.17
PCDHGB3Q9Y5G1 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.13■□□□□ 0.17
PCDHGB3Q9Y5G1 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGB3Q9Y5G1 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDHGB3Q9Y5G1 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.13■□□□□ 0.17
PCDHGB3Q9Y5G1 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.13■□□□□ 0.17
PCDHGB3Q9Y5G1 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PCDHGB3Q9Y5G1 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGB3Q9Y5G1 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGB3Q9Y5G1 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDHGB3Q9Y5G1 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGB3Q9Y5G1 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGB3Q9Y5G1 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGB3Q9Y5G1 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
PCDHGB3Q9Y5G1 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PCDHGB3Q9Y5G1 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PCDHGB3Q9Y5G1 PMPCAP1-201ENST00000508114 1576 ntBASIC16.13■□□□□ 0.17
PCDHGB3Q9Y5G1 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
PCDHGB3Q9Y5G1 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGB3Q9Y5G1 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGB3Q9Y5G1 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGB3Q9Y5G1 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGB3Q9Y5G1 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
PCDHGB3Q9Y5G1 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.12■□□□□ 0.17
PCDHGB3Q9Y5G1 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
PCDHGB3Q9Y5G1 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDHGB3Q9Y5G1 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGB3Q9Y5G1 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGB3Q9Y5G1 RBM17P3-201ENST00000417687 1192 ntBASIC16.12■□□□□ 0.17
PCDHGB3Q9Y5G1 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGB3Q9Y5G1 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.12■□□□□ 0.17
PCDHGB3Q9Y5G1 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGB3Q9Y5G1 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGB3Q9Y5G1 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.12■□□□□ 0.17
PCDHGB3Q9Y5G1 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGB3Q9Y5G1 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms