Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
RPH3AQ9Y2J0 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
RPH3AQ9Y2J0 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.58■□□□□ 0.09
RPH3AQ9Y2J0 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RPH3AQ9Y2J0 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RPH3AQ9Y2J0 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.58■□□□□ 0.09
RPH3AQ9Y2J0 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RPH3AQ9Y2J0 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
RPH3AQ9Y2J0 AC116353.5-201ENST00000638148 1699 ntBASIC15.58■□□□□ 0.08
RPH3AQ9Y2J0 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RPH3AQ9Y2J0 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RPH3AQ9Y2J0 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RPH3AQ9Y2J0 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RPH3AQ9Y2J0 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RPH3AQ9Y2J0 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RPH3AQ9Y2J0 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.58■□□□□ 0.08
RPH3AQ9Y2J0 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RPH3AQ9Y2J0 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.58■□□□□ 0.08
RPH3AQ9Y2J0 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
RPH3AQ9Y2J0 AC108751.1-201ENST00000490852 363 ntBASIC15.58■□□□□ 0.08
RPH3AQ9Y2J0 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.58■□□□□ 0.08
RPH3AQ9Y2J0 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.58■□□□□ 0.08
RPH3AQ9Y2J0 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.58■□□□□ 0.08
RPH3AQ9Y2J0 AC027796.2-201ENST00000575326 344 ntBASIC15.58■□□□□ 0.08
RPH3AQ9Y2J0 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.58■□□□□ 0.08
RPH3AQ9Y2J0 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.58■□□□□ 0.08
RPH3AQ9Y2J0 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.58■□□□□ 0.08
RPH3AQ9Y2J0 AC140113.2-201ENST00000604370 208 ntBASIC15.58■□□□□ 0.08
RPH3AQ9Y2J0 Z83851.2-201ENST00000609564 659 ntBASIC15.58■□□□□ 0.08
RPH3AQ9Y2J0 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.58■□□□□ 0.08
RPH3AQ9Y2J0 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RPH3AQ9Y2J0 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RPH3AQ9Y2J0 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.58■□□□□ 0.08
RPH3AQ9Y2J0 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
RPH3AQ9Y2J0 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RPH3AQ9Y2J0 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RPH3AQ9Y2J0 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.58■□□□□ 0.08
RPH3AQ9Y2J0 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RPH3AQ9Y2J0 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.58■□□□□ 0.08
RPH3AQ9Y2J0 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RPH3AQ9Y2J0 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RPH3AQ9Y2J0 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RPH3AQ9Y2J0 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.57■□□□□ 0.08
RPH3AQ9Y2J0 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RPH3AQ9Y2J0 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RPH3AQ9Y2J0 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RPH3AQ9Y2J0 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RPH3AQ9Y2J0 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RPH3AQ9Y2J0 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.57■□□□□ 0.08
RPH3AQ9Y2J0 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
RPH3AQ9Y2J0 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RPH3AQ9Y2J0 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
RPH3AQ9Y2J0 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
RPH3AQ9Y2J0 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RPH3AQ9Y2J0 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RPH3AQ9Y2J0 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.57■□□□□ 0.08
RPH3AQ9Y2J0 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.57■□□□□ 0.08
RPH3AQ9Y2J0 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RPH3AQ9Y2J0 AC009947.1-201ENST00000444350 727 ntBASIC15.57■□□□□ 0.08
RPH3AQ9Y2J0 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.57■□□□□ 0.08
RPH3AQ9Y2J0 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RPH3AQ9Y2J0 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
RPH3AQ9Y2J0 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.57■□□□□ 0.08
RPH3AQ9Y2J0 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.57■□□□□ 0.08
RPH3AQ9Y2J0 MIR4751-201ENST00000578027 74 ntBASIC15.57■□□□□ 0.08
RPH3AQ9Y2J0 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.57■□□□□ 0.08
RPH3AQ9Y2J0 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.57■□□□□ 0.08
RPH3AQ9Y2J0 AC055717.3-201ENST00000622967 595 ntBASIC15.57■□□□□ 0.08
RPH3AQ9Y2J0 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
RPH3AQ9Y2J0 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.57■□□□□ 0.08
RPH3AQ9Y2J0 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RPH3AQ9Y2J0 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RPH3AQ9Y2J0 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RPH3AQ9Y2J0 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RPH3AQ9Y2J0 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RPH3AQ9Y2J0 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RPH3AQ9Y2J0 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RPH3AQ9Y2J0 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
RPH3AQ9Y2J0 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RPH3AQ9Y2J0 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.57■□□□□ 0.08
RPH3AQ9Y2J0 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
RPH3AQ9Y2J0 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RPH3AQ9Y2J0 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
RPH3AQ9Y2J0 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RPH3AQ9Y2J0 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.56■□□□□ 0.08
RPH3AQ9Y2J0 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
RPH3AQ9Y2J0 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.56■□□□□ 0.08
RPH3AQ9Y2J0 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
RPH3AQ9Y2J0 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.56■□□□□ 0.08
RPH3AQ9Y2J0 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.56■□□□□ 0.08
RPH3AQ9Y2J0 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
RPH3AQ9Y2J0 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RPH3AQ9Y2J0 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
RPH3AQ9Y2J0 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RPH3AQ9Y2J0 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
RPH3AQ9Y2J0 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.56■□□□□ 0.08
RPH3AQ9Y2J0 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.56■□□□□ 0.08
RPH3AQ9Y2J0 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
RPH3AQ9Y2J0 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.56■□□□□ 0.08
RPH3AQ9Y2J0 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms