Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SYNPO2Q9UMS6 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SYNPO2Q9UMS6 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.35■□□□□ 0.69
SYNPO2Q9UMS6 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SYNPO2Q9UMS6 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.34■□□□□ 0.69
SYNPO2Q9UMS6 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC19.34■□□□□ 0.69
SYNPO2Q9UMS6 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.34■□□□□ 0.69
SYNPO2Q9UMS6 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SYNPO2Q9UMS6 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SYNPO2Q9UMS6 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SYNPO2Q9UMS6 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SYNPO2Q9UMS6 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SYNPO2Q9UMS6 TUBB3P1-201ENST00000405796 1332 ntBASIC19.34■□□□□ 0.69
SYNPO2Q9UMS6 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.34■□□□□ 0.69
SYNPO2Q9UMS6 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SYNPO2Q9UMS6 KLF2P3-201ENST00000451977 1087 ntBASIC19.34■□□□□ 0.69
SYNPO2Q9UMS6 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.34■□□□□ 0.69
SYNPO2Q9UMS6 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SYNPO2Q9UMS6 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC19.34■□□□□ 0.69
SYNPO2Q9UMS6 AC093512.1-201ENST00000617969 520 ntBASIC19.34■□□□□ 0.69
SYNPO2Q9UMS6 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SYNPO2Q9UMS6 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.34■□□□□ 0.69
SYNPO2Q9UMS6 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SYNPO2Q9UMS6 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SYNPO2Q9UMS6 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
SYNPO2Q9UMS6 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SYNPO2Q9UMS6 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.34■□□□□ 0.69
SYNPO2Q9UMS6 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC19.34■□□□□ 0.69
SYNPO2Q9UMS6 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SYNPO2Q9UMS6 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.33■□□□□ 0.69
SYNPO2Q9UMS6 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SYNPO2Q9UMS6 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
SYNPO2Q9UMS6 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SYNPO2Q9UMS6 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.33■□□□□ 0.69
SYNPO2Q9UMS6 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SYNPO2Q9UMS6 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SYNPO2Q9UMS6 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.33■□□□□ 0.69
SYNPO2Q9UMS6 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
SYNPO2Q9UMS6 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SYNPO2Q9UMS6 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
SYNPO2Q9UMS6 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.33■□□□□ 0.69
SYNPO2Q9UMS6 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
SYNPO2Q9UMS6 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SYNPO2Q9UMS6 AL671710.1-201ENST00000610245 2349 ntBASIC19.33■□□□□ 0.69
SYNPO2Q9UMS6 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
SYNPO2Q9UMS6 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.33■□□□□ 0.68
SYNPO2Q9UMS6 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.33■□□□□ 0.68
SYNPO2Q9UMS6 VMO1-203ENST00000416307 712 ntTSL 2 BASIC19.33■□□□□ 0.68
SYNPO2Q9UMS6 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.33■□□□□ 0.68
SYNPO2Q9UMS6 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.33■□□□□ 0.68
SYNPO2Q9UMS6 HLA-J-202ENST00000469281 1241 ntBASIC19.33■□□□□ 0.68
SYNPO2Q9UMS6 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
SYNPO2Q9UMS6 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SYNPO2Q9UMS6 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
SYNPO2Q9UMS6 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SYNPO2Q9UMS6 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
SYNPO2Q9UMS6 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SYNPO2Q9UMS6 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.33■□□□□ 0.68
SYNPO2Q9UMS6 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SYNPO2Q9UMS6 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SYNPO2Q9UMS6 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SYNPO2Q9UMS6 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SYNPO2Q9UMS6 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SYNPO2Q9UMS6 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYNPO2Q9UMS6 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
SYNPO2Q9UMS6 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SYNPO2Q9UMS6 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.32■□□□□ 0.68
SYNPO2Q9UMS6 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYNPO2Q9UMS6 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYNPO2Q9UMS6 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYNPO2Q9UMS6 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SYNPO2Q9UMS6 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYNPO2Q9UMS6 DPM2-202ENST00000373110 738 ntTSL 2 BASIC19.32■□□□□ 0.68
SYNPO2Q9UMS6 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SYNPO2Q9UMS6 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.32■□□□□ 0.68
SYNPO2Q9UMS6 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.32■□□□□ 0.68
SYNPO2Q9UMS6 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
SYNPO2Q9UMS6 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
SYNPO2Q9UMS6 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.32■□□□□ 0.68
SYNPO2Q9UMS6 AC140878.1-201ENST00000565277 250 ntBASIC19.32■□□□□ 0.68
SYNPO2Q9UMS6 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC19.32■□□□□ 0.68
SYNPO2Q9UMS6 AC139713.2-201ENST00000641328 2723 ntBASIC19.32■□□□□ 0.68
SYNPO2Q9UMS6 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SYNPO2Q9UMS6 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SYNPO2Q9UMS6 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
SYNPO2Q9UMS6 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYNPO2Q9UMS6 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SYNPO2Q9UMS6 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SYNPO2Q9UMS6 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYNPO2Q9UMS6 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SYNPO2Q9UMS6 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
SYNPO2Q9UMS6 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
SYNPO2Q9UMS6 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.31■□□□□ 0.68
SYNPO2Q9UMS6 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.31■□□□□ 0.68
SYNPO2Q9UMS6 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYNPO2Q9UMS6 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYNPO2Q9UMS6 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SYNPO2Q9UMS6 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYNPO2Q9UMS6 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYNPO2Q9UMS6 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms