Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ECHDC1Q9NTX5 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
ECHDC1Q9NTX5 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC20.59■□□□□ 0.89
ECHDC1Q9NTX5 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ECHDC1Q9NTX5 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ECHDC1Q9NTX5 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ECHDC1Q9NTX5 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC20.59■□□□□ 0.89
ECHDC1Q9NTX5 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ECHDC1Q9NTX5 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ECHDC1Q9NTX5 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
ECHDC1Q9NTX5 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ECHDC1Q9NTX5 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ECHDC1Q9NTX5 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC20.59■□□□□ 0.89
ECHDC1Q9NTX5 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC20.59■□□□□ 0.89
ECHDC1Q9NTX5 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
ECHDC1Q9NTX5 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ECHDC1Q9NTX5 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
ECHDC1Q9NTX5 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ECHDC1Q9NTX5 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ECHDC1Q9NTX5 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ECHDC1Q9NTX5 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
ECHDC1Q9NTX5 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.59■□□□□ 0.89
ECHDC1Q9NTX5 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC20.59■□□□□ 0.89
ECHDC1Q9NTX5 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.59■□□□□ 0.89
ECHDC1Q9NTX5 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC20.59■□□□□ 0.89
ECHDC1Q9NTX5 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC20.59■□□□□ 0.89
ECHDC1Q9NTX5 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.59■□□□□ 0.89
ECHDC1Q9NTX5 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ECHDC1Q9NTX5 AC140113.2-201ENST00000604370 208 ntBASIC20.59■□□□□ 0.89
ECHDC1Q9NTX5 AC027601.4-201ENST00000611259 610 ntBASIC20.59■□□□□ 0.89
ECHDC1Q9NTX5 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ECHDC1Q9NTX5 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ECHDC1Q9NTX5 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ECHDC1Q9NTX5 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ECHDC1Q9NTX5 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ECHDC1Q9NTX5 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ECHDC1Q9NTX5 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ECHDC1Q9NTX5 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ECHDC1Q9NTX5 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ECHDC1Q9NTX5 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ECHDC1Q9NTX5 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC20.59■□□□□ 0.89
ECHDC1Q9NTX5 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
ECHDC1Q9NTX5 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.59■□□□□ 0.89
ECHDC1Q9NTX5 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC20.59■□□□□ 0.89
ECHDC1Q9NTX5 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC20.58■□□□□ 0.89
ECHDC1Q9NTX5 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
ECHDC1Q9NTX5 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC20.58■□□□□ 0.89
ECHDC1Q9NTX5 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ECHDC1Q9NTX5 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC20.58■□□□□ 0.89
ECHDC1Q9NTX5 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.58■□□□□ 0.89
ECHDC1Q9NTX5 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ECHDC1Q9NTX5 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
ECHDC1Q9NTX5 HCG4-201ENST00000418983 998 ntBASIC20.58■□□□□ 0.89
ECHDC1Q9NTX5 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
ECHDC1Q9NTX5 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
ECHDC1Q9NTX5 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.58■□□□□ 0.89
ECHDC1Q9NTX5 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
ECHDC1Q9NTX5 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.58■□□□□ 0.89
ECHDC1Q9NTX5 CD63-210ENST00000550776 870 ntTSL 5 BASIC20.58■□□□□ 0.89
ECHDC1Q9NTX5 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.58■□□□□ 0.89
ECHDC1Q9NTX5 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC20.58■□□□□ 0.89
ECHDC1Q9NTX5 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ECHDC1Q9NTX5 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC20.58■□□□□ 0.89
ECHDC1Q9NTX5 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
ECHDC1Q9NTX5 SNX33P1-201ENST00000592116 1762 ntBASIC20.58■□□□□ 0.89
ECHDC1Q9NTX5 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ECHDC1Q9NTX5 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC20.58■□□□□ 0.88
ECHDC1Q9NTX5 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
ECHDC1Q9NTX5 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ECHDC1Q9NTX5 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
ECHDC1Q9NTX5 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.58■□□□□ 0.88
ECHDC1Q9NTX5 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ECHDC1Q9NTX5 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ECHDC1Q9NTX5 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
ECHDC1Q9NTX5 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ECHDC1Q9NTX5 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
ECHDC1Q9NTX5 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ECHDC1Q9NTX5 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ECHDC1Q9NTX5 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ECHDC1Q9NTX5 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ECHDC1Q9NTX5 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC20.57■□□□□ 0.88
ECHDC1Q9NTX5 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ECHDC1Q9NTX5 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ECHDC1Q9NTX5 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC20.57■□□□□ 0.88
ECHDC1Q9NTX5 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ECHDC1Q9NTX5 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ECHDC1Q9NTX5 AP000347.1-202ENST00000435868 847 ntBASIC20.57■□□□□ 0.88
ECHDC1Q9NTX5 AL591424.1-201ENST00000442569 1213 ntBASIC20.57■□□□□ 0.88
ECHDC1Q9NTX5 AL513480.1-201ENST00000451731 511 ntBASIC20.57■□□□□ 0.88
ECHDC1Q9NTX5 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC20.57■□□□□ 0.88
ECHDC1Q9NTX5 AMT-206ENST00000458307 1860 ntTSL 2 BASIC20.57■□□□□ 0.88
ECHDC1Q9NTX5 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.57■□□□□ 0.88
ECHDC1Q9NTX5 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ECHDC1Q9NTX5 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC20.57■□□□□ 0.88
ECHDC1Q9NTX5 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
ECHDC1Q9NTX5 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ECHDC1Q9NTX5 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC20.57■□□□□ 0.88
ECHDC1Q9NTX5 AC087641.1-201ENST00000557561 1021 ntBASIC20.57■□□□□ 0.88
ECHDC1Q9NTX5 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.57■□□□□ 0.88
ECHDC1Q9NTX5 AC018845.2-201ENST00000568326 409 ntBASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms