Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.52■□□□□ 0.4
HPS4Q9NQG7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.52■□□□□ 0.4
HPS4Q9NQG7 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HPS4Q9NQG7 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HPS4Q9NQG7 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.52■□□□□ 0.4
HPS4Q9NQG7 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HPS4Q9NQG7 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.52■□□□□ 0.4
HPS4Q9NQG7 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.52■□□□□ 0.4
HPS4Q9NQG7 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HPS4Q9NQG7 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HPS4Q9NQG7 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HPS4Q9NQG7 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HPS4Q9NQG7 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HPS4Q9NQG7 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HPS4Q9NQG7 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HPS4Q9NQG7 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
HPS4Q9NQG7 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
HPS4Q9NQG7 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
HPS4Q9NQG7 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.52■□□□□ 0.4
HPS4Q9NQG7 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
HPS4Q9NQG7 AC011467.4-201ENST00000594891 528 ntBASIC17.52■□□□□ 0.4
HPS4Q9NQG7 AC092364.2-202ENST00000597012 1073 ntBASIC17.52■□□□□ 0.4
HPS4Q9NQG7 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HPS4Q9NQG7 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.52■□□□□ 0.4
HPS4Q9NQG7 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HPS4Q9NQG7 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
HPS4Q9NQG7 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HPS4Q9NQG7 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
HPS4Q9NQG7 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HPS4Q9NQG7 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.39
HPS4Q9NQG7 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HPS4Q9NQG7 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HPS4Q9NQG7 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
HPS4Q9NQG7 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HPS4Q9NQG7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
HPS4Q9NQG7 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.51■□□□□ 0.39
HPS4Q9NQG7 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
HPS4Q9NQG7 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
HPS4Q9NQG7 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HPS4Q9NQG7 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HPS4Q9NQG7 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
HPS4Q9NQG7 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
HPS4Q9NQG7 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HPS4Q9NQG7 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HPS4Q9NQG7 AC025678.2-201ENST00000562061 970 ntBASIC17.51■□□□□ 0.39
HPS4Q9NQG7 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.51■□□□□ 0.39
HPS4Q9NQG7 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.51■□□□□ 0.39
HPS4Q9NQG7 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.51■□□□□ 0.39
HPS4Q9NQG7 AC009093.7-201ENST00000623853 1223 ntBASIC17.51■□□□□ 0.39
HPS4Q9NQG7 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
HPS4Q9NQG7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HPS4Q9NQG7 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HPS4Q9NQG7 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HPS4Q9NQG7 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.51■□□□□ 0.39
HPS4Q9NQG7 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HPS4Q9NQG7 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
HPS4Q9NQG7 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HPS4Q9NQG7 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
HPS4Q9NQG7 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HPS4Q9NQG7 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
HPS4Q9NQG7 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HPS4Q9NQG7 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HPS4Q9NQG7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HPS4Q9NQG7 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
HPS4Q9NQG7 AC134043.2-201ENST00000624206 2238 ntBASIC17.5■□□□□ 0.39
HPS4Q9NQG7 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.5■□□□□ 0.39
HPS4Q9NQG7 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HPS4Q9NQG7 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HPS4Q9NQG7 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.5■□□□□ 0.39
HPS4Q9NQG7 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.5■□□□□ 0.39
HPS4Q9NQG7 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.5■□□□□ 0.39
HPS4Q9NQG7 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.5■□□□□ 0.39
HPS4Q9NQG7 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HPS4Q9NQG7 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.5■□□□□ 0.39
HPS4Q9NQG7 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.5■□□□□ 0.39
HPS4Q9NQG7 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HPS4Q9NQG7 MIR4515-201ENST00000584082 81 ntBASIC17.5■□□□□ 0.39
HPS4Q9NQG7 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HPS4Q9NQG7 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HPS4Q9NQG7 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.5■□□□□ 0.39
HPS4Q9NQG7 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.5■□□□□ 0.39
HPS4Q9NQG7 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HPS4Q9NQG7 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HPS4Q9NQG7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.5■□□□□ 0.39
HPS4Q9NQG7 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HPS4Q9NQG7 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.5■□□□□ 0.39
HPS4Q9NQG7 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.5■□□□□ 0.39
HPS4Q9NQG7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
HPS4Q9NQG7 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
HPS4Q9NQG7 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HPS4Q9NQG7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.5■□□□□ 0.39
HPS4Q9NQG7 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HPS4Q9NQG7 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HPS4Q9NQG7 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HPS4Q9NQG7 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HPS4Q9NQG7 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HPS4Q9NQG7 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HPS4Q9NQG7 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HPS4Q9NQG7 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
HPS4Q9NQG7 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms