Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRTM1Q9HBL6 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.32■□□□□ 0.2
LRTM1Q9HBL6 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRTM1Q9HBL6 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.32■□□□□ 0.2
LRTM1Q9HBL6 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.32■□□□□ 0.2
LRTM1Q9HBL6 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRTM1Q9HBL6 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.32■□□□□ 0.2
LRTM1Q9HBL6 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
LRTM1Q9HBL6 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.32■□□□□ 0.2
LRTM1Q9HBL6 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRTM1Q9HBL6 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRTM1Q9HBL6 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRTM1Q9HBL6 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRTM1Q9HBL6 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRTM1Q9HBL6 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRTM1Q9HBL6 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRTM1Q9HBL6 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
LRTM1Q9HBL6 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 AC132008.2-207ENST00000454517 770 ntBASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 AL353135.1-201ENST00000606729 504 ntBASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 AP001269.4-201ENST00000609611 512 ntBASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.31■□□□□ 0.2
LRTM1Q9HBL6 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.3■□□□□ 0.2
LRTM1Q9HBL6 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRTM1Q9HBL6 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
LRTM1Q9HBL6 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRTM1Q9HBL6 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
LRTM1Q9HBL6 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRTM1Q9HBL6 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRTM1Q9HBL6 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRTM1Q9HBL6 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
LRTM1Q9HBL6 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRTM1Q9HBL6 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRTM1Q9HBL6 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRTM1Q9HBL6 FER1L4-210ENST00000615531 5998 ntBASIC16.3■□□□□ 0.2
LRTM1Q9HBL6 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRTM1Q9HBL6 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRTM1Q9HBL6 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRTM1Q9HBL6 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRTM1Q9HBL6 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
LRTM1Q9HBL6 AC243591.1-201ENST00000452967 1364 ntBASIC16.3■□□□□ 0.2
LRTM1Q9HBL6 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRTM1Q9HBL6 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRTM1Q9HBL6 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
LRTM1Q9HBL6 AL590787.1-201ENST00000568856 1315 ntBASIC16.3■□□□□ 0.2
LRTM1Q9HBL6 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRTM1Q9HBL6 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.3■□□□□ 0.2
LRTM1Q9HBL6 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRTM1Q9HBL6 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
LRTM1Q9HBL6 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
LRTM1Q9HBL6 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.3■□□□□ 0.2
LRTM1Q9HBL6 PRYP5-201ENST00000451909 266 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms