Protein–RNA interactions for Protein: Q9H9E3

COG4, Conserved oligomeric Golgi complex subunit 4, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COG4Q9H9E3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COG4Q9H9E3 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
COG4Q9H9E3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COG4Q9H9E3 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
COG4Q9H9E3 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COG4Q9H9E3 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COG4Q9H9E3 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COG4Q9H9E3 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COG4Q9H9E3 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
COG4Q9H9E3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
COG4Q9H9E3 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
COG4Q9H9E3 AL603756.1-201ENST00000606511 2163 ntBASIC17.12■□□□□ 0.33
COG4Q9H9E3 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
COG4Q9H9E3 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COG4Q9H9E3 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
COG4Q9H9E3 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.12■□□□□ 0.33
COG4Q9H9E3 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
COG4Q9H9E3 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COG4Q9H9E3 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.12■□□□□ 0.33
COG4Q9H9E3 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COG4Q9H9E3 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COG4Q9H9E3 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COG4Q9H9E3 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.11■□□□□ 0.33
COG4Q9H9E3 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
COG4Q9H9E3 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COG4Q9H9E3 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
COG4Q9H9E3 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.11■□□□□ 0.33
COG4Q9H9E3 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COG4Q9H9E3 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COG4Q9H9E3 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.11■□□□□ 0.33
COG4Q9H9E3 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COG4Q9H9E3 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COG4Q9H9E3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COG4Q9H9E3 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
COG4Q9H9E3 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
COG4Q9H9E3 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.11■□□□□ 0.33
COG4Q9H9E3 SIGLEC30P-201ENST00000455569 941 ntBASIC17.11■□□□□ 0.33
COG4Q9H9E3 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.11■□□□□ 0.33
COG4Q9H9E3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
COG4Q9H9E3 BX005266.1-201ENST00000473402 457 ntBASIC17.11■□□□□ 0.33
COG4Q9H9E3 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.11■□□□□ 0.33
COG4Q9H9E3 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.11■□□□□ 0.33
COG4Q9H9E3 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.11■□□□□ 0.33
COG4Q9H9E3 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.11■□□□□ 0.33
COG4Q9H9E3 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
COG4Q9H9E3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
COG4Q9H9E3 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COG4Q9H9E3 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.11■□□□□ 0.33
COG4Q9H9E3 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
COG4Q9H9E3 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
COG4Q9H9E3 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COG4Q9H9E3 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.11■□□□□ 0.33
COG4Q9H9E3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COG4Q9H9E3 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COG4Q9H9E3 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
COG4Q9H9E3 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
COG4Q9H9E3 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
COG4Q9H9E3 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COG4Q9H9E3 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COG4Q9H9E3 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COG4Q9H9E3 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COG4Q9H9E3 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
COG4Q9H9E3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
COG4Q9H9E3 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
COG4Q9H9E3 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.1■□□□□ 0.33
COG4Q9H9E3 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.1■□□□□ 0.33
COG4Q9H9E3 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
COG4Q9H9E3 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
COG4Q9H9E3 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COG4Q9H9E3 AC092053.1-201ENST00000605787 1936 ntBASIC17.1■□□□□ 0.33
COG4Q9H9E3 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COG4Q9H9E3 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COG4Q9H9E3 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COG4Q9H9E3 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COG4Q9H9E3 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COG4Q9H9E3 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COG4Q9H9E3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.1■□□□□ 0.33
COG4Q9H9E3 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COG4Q9H9E3 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.1■□□□□ 0.33
COG4Q9H9E3 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COG4Q9H9E3 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.1■□□□□ 0.33
COG4Q9H9E3 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
COG4Q9H9E3 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COG4Q9H9E3 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.1■□□□□ 0.33
COG4Q9H9E3 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.1■□□□□ 0.33
COG4Q9H9E3 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
COG4Q9H9E3 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COG4Q9H9E3 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.1■□□□□ 0.33
COG4Q9H9E3 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COG4Q9H9E3 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.1■□□□□ 0.33
COG4Q9H9E3 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.1■□□□□ 0.33
COG4Q9H9E3 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
COG4Q9H9E3 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COG4Q9H9E3 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
COG4Q9H9E3 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
COG4Q9H9E3 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COG4Q9H9E3 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
COG4Q9H9E3 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
COG4Q9H9E3 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COG4Q9H9E3 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms