Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
POLR2J3Q9H1A7 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.71■□□□□ 0.11
POLR2J3Q9H1A7 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.71■□□□□ 0.11
POLR2J3Q9H1A7 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
POLR2J3Q9H1A7 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
POLR2J3Q9H1A7 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.71■□□□□ 0.11
POLR2J3Q9H1A7 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
POLR2J3Q9H1A7 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
POLR2J3Q9H1A7 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
POLR2J3Q9H1A7 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
POLR2J3Q9H1A7 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
POLR2J3Q9H1A7 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
POLR2J3Q9H1A7 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
POLR2J3Q9H1A7 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
POLR2J3Q9H1A7 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
POLR2J3Q9H1A7 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.71■□□□□ 0.11
POLR2J3Q9H1A7 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
POLR2J3Q9H1A7 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
POLR2J3Q9H1A7 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.71■□□□□ 0.11
POLR2J3Q9H1A7 AC096582.2-201ENST00000510860 516 ntBASIC15.71■□□□□ 0.11
POLR2J3Q9H1A7 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
POLR2J3Q9H1A7 AL049597.2-201ENST00000565575 961 ntBASIC15.71■□□□□ 0.11
POLR2J3Q9H1A7 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.71■□□□□ 0.11
POLR2J3Q9H1A7 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
POLR2J3Q9H1A7 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
POLR2J3Q9H1A7 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.71■□□□□ 0.11
POLR2J3Q9H1A7 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.71■□□□□ 0.11
POLR2J3Q9H1A7 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.71■□□□□ 0.11
POLR2J3Q9H1A7 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.71■□□□□ 0.11
POLR2J3Q9H1A7 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
POLR2J3Q9H1A7 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
POLR2J3Q9H1A7 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
POLR2J3Q9H1A7 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
POLR2J3Q9H1A7 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.71■□□□□ 0.1
POLR2J3Q9H1A7 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.71■□□□□ 0.1
POLR2J3Q9H1A7 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
POLR2J3Q9H1A7 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
POLR2J3Q9H1A7 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
POLR2J3Q9H1A7 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 AL391005.1-201ENST00000623953 2435 ntBASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 SPDYE21P-201ENST00000413323 827 ntBASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 IGHV3-47-201ENST00000425060 335 ntBASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 TOB2P1-201ENST00000469761 992 ntBASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 AC092329.2-201ENST00000598402 547 ntBASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
POLR2J3Q9H1A7 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.69■□□□□ 0.1
POLR2J3Q9H1A7 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
POLR2J3Q9H1A7 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
POLR2J3Q9H1A7 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
POLR2J3Q9H1A7 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
POLR2J3Q9H1A7 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
POLR2J3Q9H1A7 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.69■□□□□ 0.1
POLR2J3Q9H1A7 AL162727.3-201ENST00000635661 2787 ntBASIC15.69■□□□□ 0.1
POLR2J3Q9H1A7 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
POLR2J3Q9H1A7 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
POLR2J3Q9H1A7 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.69■□□□□ 0.1
POLR2J3Q9H1A7 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms