Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH11XQ9BZA7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH11XQ9BZA7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH11XQ9BZA7 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
PCDH11XQ9BZA7 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH11XQ9BZA7 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDH11XQ9BZA7 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH11XQ9BZA7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH11XQ9BZA7 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH11XQ9BZA7 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH11XQ9BZA7 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH11XQ9BZA7 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PCDH11XQ9BZA7 TUBB8P12-201ENST00000308911 1335 ntBASIC21.73■■□□□ 1.07
PCDH11XQ9BZA7 TUBB7P-202ENST00000428444 1305 ntBASIC21.73■■□□□ 1.07
PCDH11XQ9BZA7 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC21.73■■□□□ 1.07
PCDH11XQ9BZA7 TUBB8P7-204ENST00000567960 1332 ntBASIC21.73■■□□□ 1.07
PCDH11XQ9BZA7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
PCDH11XQ9BZA7 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH11XQ9BZA7 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH11XQ9BZA7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH11XQ9BZA7 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH11XQ9BZA7 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH11XQ9BZA7 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH11XQ9BZA7 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PCDH11XQ9BZA7 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH11XQ9BZA7 MTND6P24-201ENST00000440466 518 ntBASIC21.73■■□□□ 1.07
PCDH11XQ9BZA7 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC21.73■■□□□ 1.07
PCDH11XQ9BZA7 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDH11XQ9BZA7 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDH11XQ9BZA7 CDK4-206ENST00000549606 558 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDH11XQ9BZA7 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH11XQ9BZA7 PRR29-204ENST00000577953 565 ntTSL 4 BASIC21.73■■□□□ 1.07
PCDH11XQ9BZA7 AL132655.2-201ENST00000596276 594 ntBASIC21.73■■□□□ 1.07
PCDH11XQ9BZA7 RN7SL828P-201ENST00000607615 303 ntBASIC21.73■■□□□ 1.07
PCDH11XQ9BZA7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH11XQ9BZA7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PCDH11XQ9BZA7 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH11XQ9BZA7 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC21.73■■□□□ 1.07
PCDH11XQ9BZA7 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH11XQ9BZA7 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH11XQ9BZA7 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC21.72■■□□□ 1.07
PCDH11XQ9BZA7 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDH11XQ9BZA7 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDH11XQ9BZA7 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC21.72■■□□□ 1.07
PCDH11XQ9BZA7 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDH11XQ9BZA7 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDH11XQ9BZA7 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC21.72■■□□□ 1.07
PCDH11XQ9BZA7 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDH11XQ9BZA7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDH11XQ9BZA7 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
PCDH11XQ9BZA7 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDH11XQ9BZA7 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDH11XQ9BZA7 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDH11XQ9BZA7 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
PCDH11XQ9BZA7 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDH11XQ9BZA7 AL080243.2-201ENST00000418783 582 ntBASIC21.72■■□□□ 1.07
PCDH11XQ9BZA7 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC21.72■■□□□ 1.07
PCDH11XQ9BZA7 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDH11XQ9BZA7 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC21.72■■□□□ 1.07
PCDH11XQ9BZA7 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC21.72■■□□□ 1.07
PCDH11XQ9BZA7 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
PCDH11XQ9BZA7 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC21.72■■□□□ 1.07
PCDH11XQ9BZA7 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC21.72■■□□□ 1.07
PCDH11XQ9BZA7 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC21.72■■□□□ 1.07
PCDH11XQ9BZA7 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC21.72■■□□□ 1.07
PCDH11XQ9BZA7 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC21.72■■□□□ 1.07
PCDH11XQ9BZA7 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC21.72■■□□□ 1.07
PCDH11XQ9BZA7 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC21.72■■□□□ 1.07
PCDH11XQ9BZA7 AC004840.1-201ENST00000636359 365 ntBASIC21.72■■□□□ 1.07
PCDH11XQ9BZA7 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC21.72■■□□□ 1.07
PCDH11XQ9BZA7 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.72■■□□□ 1.07
PCDH11XQ9BZA7 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC21.72■■□□□ 1.07
PCDH11XQ9BZA7 GNE-204ENST00000539208 2190 ntTSL 2 BASIC21.72■■□□□ 1.07
PCDH11XQ9BZA7 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDH11XQ9BZA7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDH11XQ9BZA7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDH11XQ9BZA7 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDH11XQ9BZA7 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDH11XQ9BZA7 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PCDH11XQ9BZA7 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDH11XQ9BZA7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDH11XQ9BZA7 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDH11XQ9BZA7 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PCDH11XQ9BZA7 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDH11XQ9BZA7 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDH11XQ9BZA7 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDH11XQ9BZA7 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
PCDH11XQ9BZA7 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PCDH11XQ9BZA7 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
PCDH11XQ9BZA7 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC21.71■■□□□ 1.07
PCDH11XQ9BZA7 KRT17P7-201ENST00000451704 1104 ntBASIC21.71■■□□□ 1.07
PCDH11XQ9BZA7 AC098859.1-201ENST00000502915 1238 ntBASIC21.71■■□□□ 1.07
PCDH11XQ9BZA7 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC21.71■■□□□ 1.07
PCDH11XQ9BZA7 TP53TG3HP-202ENST00000569755 579 ntBASIC21.71■■□□□ 1.07
PCDH11XQ9BZA7 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC21.71■■□□□ 1.07
PCDH11XQ9BZA7 AC013467.2-201ENST00000605472 835 ntBASIC21.71■■□□□ 1.07
PCDH11XQ9BZA7 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDH11XQ9BZA7 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDH11XQ9BZA7 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC21.71■■□□□ 1.07
PCDH11XQ9BZA7 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms