Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 LTB4R2-202ENST00000528054 3092 ntBASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 RHBDF1P1-201ENST00000427504 1941 ntBASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 LINC02199-201ENST00000506655 2702 ntBASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 CBR1-202ENST00000399191 838 ntTSL 3 BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 AL355306.1-201ENST00000415580 579 ntBASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 AC254562.1-201ENST00000417586 456 ntBASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 AL671277.1-201ENST00000429656 993 ntBASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 SLC25A6P5-201ENST00000435663 894 ntBASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 MKNK2P1-201ENST00000437526 628 ntBASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 AC079140.1-201ENST00000508039 487 ntBASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 AC243562.1-201ENST00000560672 389 ntBASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 AL390955.2-201ENST00000603032 514 ntBASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 AC079781.4-201ENST00000641908 219 ntBASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 AC005915.1-201ENST00000624912 2018 ntBASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC5.74□□□□□ -1.49
KRTAP4-3Q9BYR4 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms